Pseudomonas alkylphenolica: PSAKL28_07350
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Entry
PSAKL28_07350 CDS
T03238
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
palk
Pseudomonas alkylphenolica
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palk03016
]
PSAKL28_07350
Enzymes [BR:
palk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PSAKL28_07350
Transfer RNA biogenesis [BR:
palk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSAKL28_07350
Prokaryotic type
PSAKL28_07350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
TruB_C
LRR_FBXL18
HTH_CodY
Motif
Other DBs
NCBI-ProteinID:
AIL59969
UniProt:
A0A077F7N3
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All DBs
Position
799275..800192
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLASGVLPLCFG
EATKFSQYLLDSDKGYETVMQLGQTTTTGDAEGEVLKTREVTVGRADVEAVLPQFRGEIS
QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTINRLELLECEGTRVRLSVGCSKGTYI
RTLVEDIGEMLGCGAYVAELRRTHAGPFELAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLQDWPLLQFSEHSAFYWLHGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtcaaacgtattcgtcgtaacgtcagtggcatcatcctgctcgacaagccg
ttggggtttacctccaacgctgcgctgcagaaggtccgctggctgctcaatgccgagaag
gccggtcacaccggcagtctcgacccgctggccagtggcgtgctgccgctgtgcttcggt
gaggccaccaagttttcccagtacctgctcgattccgacaaaggttacgagacggtcatg
caactggggcagaccaccaccaccggcgatgccgagggtgaagtgctgaaaacccgcgaa
gtgaccgttggtcgcgccgatgttgaagccgttctgccacaatttcgtggtgaaatcagt
cagataccaccgatgtactcggccctcaagcgcgacggacagccgctgtacaagctcgcc
cgtgcaggtgaagtagtggagcgcgaggcgcgttctgttactattaaccgcttggagttg
ctcgagtgcgaaggcacccgcgttcgactgtcggttggctgcagcaaaggcacctacatc
cgcaccctggtcgaagatatcggcgagatgctcggttgtggcgcctatgtcgccgaactg
cgtcgcacgcacgccgggccatttgaactggcgcagaccgtgaccctcgaggaactcgaa
gcggttcacgccgaaggtggcaacgaagcggttgatcgcttcctgatgccctcggacagc
ggcctgcaagactggcctctgctgcagttttccgagcacagtgctttctactggctgcac
ggtcagccggtcagagcccccgacgcgccgaagttcggcatggtccgggtacaggatcac
aacggtcgtttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcagaatga
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