Pseudomonas alkylphenolica: PSAKL28_10610
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Entry
PSAKL28_10610 CDS
T03238
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
palk
Pseudomonas alkylphenolica
Pathway
palk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSAKL28_10610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palk03400
]
PSAKL28_10610
Enzymes [BR:
palk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PSAKL28_10610
DNA repair and recombination proteins [BR:
palk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PSAKL28_10610
Prokaryotic type
PSAKL28_10610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIL60287
UniProt:
A0A077F478
LinkDB
All DBs
Position
1158266..1158958
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AA seq
230 aa
AA seq
DB search
MTDDDRIKLEPSWKEALRAEFDQPYMQQLREFLRQEYAAGKEIYPPGPLIFNALNSTPLD
QVKVVILGQDPYHGPGQAHGLCFSVQPGISTPPSLVNIYKELHRDLNIEIPTHGCLQHWA
DQGVLLLNTTMTVERANAASHAKKGWEFFTDRIIELVSEHQPNTVFLLWGAHAQSKQKLI
DGTKHLVLKSVHPSPLSAYRGFLGCGHFSRTNKFLEQHGLTPVEWALPPL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgacgatcgcatcaaacttgaaccgagctggaaagaagcgctgcgcgccgag
ttcgaccagccctacatgcagcagctgcgggaatttctgcgccaggaatatgcggcgggc
aaagagatttatccaccgggcccgttgattttcaacgcgctcaattccacgccgctggat
caggtgaaagtggtgatcctcggccaggatccctaccacggccctggccaggcccatggt
ctgtgtttttcggtgcagccggggatttccacgccgccgtcgctggtcaacatttacaag
gaattgcaccgcgacctgaacattgagattcccacgcatggctgcctgcagcactgggcg
gatcaaggtgtgttgctgctcaataccaccatgaccgtggagcgggccaatgccgcctcg
cacgccaagaagggctgggagttcttcaccgaccgcatcatcgaactggtcagcgagcat
cagcccaatacggtgttcctgctctggggcgcccatgcgcagagtaagcagaagttgatc
gatggcaccaagcatctggtgctcaagtcggtgcacccgtcgccgttgtccgcctaccgc
gggttcctcggctgtgggcatttcagccggaccaacaagttcctcgaacagcacggcctg
acgccggtcgaatgggcgttgccgccgctgtaa
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