Pseudomonas alkylphenolica: PSAKL28_10890
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Entry
PSAKL28_10890 CDS
T03238
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
palk
Pseudomonas alkylphenolica
Pathway
palk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSAKL28_10890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palk03400
]
PSAKL28_10890
DNA repair and recombination proteins [BR:
palk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PSAKL28_10890
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PSAKL28_10890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AIL60315
UniProt:
A0A077F7R6
LinkDB
All DBs
Position
1186547..1187230
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AA seq
227 aa
AA seq
DB search
MELPVGQPAYVLHSRAYRETSALVDFLTPQGRLRAVLRRARGKGGSQARPFVPLEVEFRG
RGELKTVGRLDSVGVAAWLNGDALFSGLYLNELLIRLLPAEDPHPVVFEHYAATLQALAA
GRPLEPLLRAFEWRLLDELGYGFALDQDINGEPLVVDGLYRLQVDAGLERVYLLQPGLFR
GDELAAMAEADWNVPGALGAAKRLMRQALAVHLGGRPLVSRELFRKR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggaactgccagttggccaaccggcctacgtgctgcacagccgggcctaccgtgaaacc
agtgcgctggtggatttcctcaccccgcaagggcgcctgcgcgcggtgttacgccgtgcg
cgtggcaagggcggcagccaggcccgacctttcgtaccccttgaagtcgagtttcgtggc
cgtggcgagctgaagacggtcggccgcctggacagtgtcggcgtggccgcctggctcaat
ggcgatgccttgttcagtggcctgtacctcaatgaactgctgattcgcctgttgcccgcc
gaggatccgcatccggtggtgttcgagcactacgcggcaaccctgcaggcgttggctgcc
gggcggccgctggaaccgctgctgcgggccttcgagtggcgcttgctagatgaactgggc
tacggctttgccctcgatcaggacatcaatggcgagcctctggtcgtcgatggcctgtac
cgtctgcaggtggacgccgggcttgagcgggtctacctgctgcagcccggtttgttccgt
ggtgacgagctggcggccatggccgaagccgactggaatgtccccggtgccttgggtgcg
gccaagcgcctgatgcgtcaggcgctggccgtgcacctgggtggacggccactggtcagt
cgggaactgtttcgcaagcgctga
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