Pseudomonas alkylphenolica: PSAKL28_12190
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Entry
PSAKL28_12190 CDS
T03238
Name
(GenBank) ATP-dependent helicase HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
palk
Pseudomonas alkylphenolica
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palk03021
]
PSAKL28_12190
Transcription machinery [BR:
palk03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PSAKL28_12190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AIL60445
UniProt:
A0A077F833
LinkDB
All DBs
Position
complement(1334327..1337173)
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYSLRNAPLTRVRFSPG
DQITHFEGWKLTVREVDDVDGLLVYHGLDGQNQACTLPETQLSNFIQFRLASDRLFAGQI
DPLPWFSLRYNTLEHTSRQLQSALWGLGGTRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFIESDA
SNPFEDAQLALVALEWLTEDEKAQDALFAAGWDLLVVDEAHHLVWHEEQVSPEYGLVEQL
AQVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESEHYRPVAEAVQELLDE
GRLSAKAHATIEGFLGAEGEALLAAVNDGDTQASARLIRELLDRHGTGRVLFRNTRAAVQ
GFPERNLHPYPLPSPDQYMELPVGEHAELYPEVAFQSQGDTDEEERWWRFDPRVDWLIDT
LKMLKRVKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMSILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVLFDLPAHPDLLEQRIGRLDRIGQKHTIELHVPYLQNSP
QERLFQWYDQALNAFLATCPTGNALQHQFGPRLLPLLESGDDGEWQVLVDEARAERERLE
AELHSGRDRLLELNSGGAGEGQALVEAILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRALQLGRYLPPAALRCLLDTNGNDLASRVSF
ETLNDQLESVPKASANKFIQAQRDVLTPRINSGEAKIMPRHAERVAEAQRRLAAETDEEL
ARLTALQAVNPSVRDSEIDAVRKQREQGLAMLDKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagcgacagcgaagccgagctaggt
ctggggaccgttctggcacaggacggccgcttgttgaccgtgctctacccggccactggc
gacacccgccagtactccctgcgcaatgcgcccctgacccgggtgcgcttctcgcccggt
gaccagatcacccacttcgaaggctggaaactgaccgttcgcgaggtcgatgacgtcgac
ggcctgctggtttaccacgggctcgacgggcagaaccaggcctgcacgctgccggaaacc
caactgtcgaacttcatccagttccgcttggccagcgaccgcctgttcgccggacagatc
gacccgttgccgtggttctcgctgcgctacaacaccctggaacacaccagccgccagttg
caatccgcgctgtggggcctgggcggcacccgcgcccaacctatcgcccaccagctgcat
atcgcccgcgaagtcgccgaccgtattgccccacgggtgctgctggccgatgaagtgggc
ctgggcaagaccatcgaggccggcctggtgatccaccgccagttgctctcgggccgtgcc
agccgtgtgctgatcctggtgccggagaacctgcagcaccagtggctggtagagatgcgc
cgccgcttcaacctgcaggtagcgctgttcgacgccgagcgctttatcgaaagcgacgcc
agcaacccgtttgaagatgcccagttggcgctggtcgccctggaatggctgaccgaagac
gaaaaagcccaggacgcactgttcgccgccggctgggacttgctggtagtcgacgaagcc
catcacctggtctggcatgaagagcaggtcagccctgagtatggtctggtcgagcaactg
gcccaggtcattcctggtgtcctgctgctgaccgcaacccctgagcaactgggccaggac
agccacttcgcgcgcctgcgcctgctcgatccgaaccgtttccatgacctggcggccttc
cgtgccgaaagcgagcactatcgcccggtcgccgaagcggtacaggagctgctggacgaa
ggtcgcctgtcggccaaagcccacgccaccatcgaaggcttcctcggtgccgaaggcgaa
gccctgctcgccgcggtcaacgacggcgacacccaggccagcgcgcgcttgattcgcgag
ctgctcgatcgccacggtaccggccgcgtactgttccgcaacacccgtgccgccgttcag
ggctttccggaacgcaatctgcacccttatccgctgccaagccccgatcaatacatggag
ctgccggttggcgaacacgccgaactgtaccctgaggtggcgttccagtctcagggcgac
actgacgaagaagaacgctggtggcgcttcgaccctcgggtcgactggctgatcgacacc
ctgaagatgctcaagcgggtcaaggttctggtgatctgcgcccacgccgaaaccgccatg
gacctggaagacgccctgcgcgtacgttccgggattccggccacggtgttccatgaaggc
atgagcatcctcgaacgtgaccgtgccgccgcctacttcgctgacgaagaattcggcgcg
caagtgctgatctgctcggaaatcggcagtgaaggccgcaacttccagttcgcccatcac
ctggtgctgttcgacctgcctgcccaccctgacctgctcgagcagcgtatcggtcgtctc
gaccgtatcggccagaagcacaccatcgaactgcatgtaccgtacctgcagaacagcccg
caagagcgcctgttccaatggtacgaccaggcactgaacgccttcctcgccacctgcccg
accggcaacgccctgcaacatcagttcggcccacgcctgctgccactgctcgaaagtggt
gacgacggtgaatggcaagttctggtcgatgaggcccgcgccgagcgtgagcgcctggaa
gccgagctgcatagcggtcgcgaccgcctgctggagctcaactccggtggcgctggcgaa
ggtcaggccctggtcgaggcgatccttgagcaagacgatcagttcgctctgccgatctac
atggaaaccctgtttgacgccttcggcatcgacagcgaagaccactcggaaaacgccctg
atcctcaagccgagcgaaaaaatgctcgacgccagcttcccgctgggcgacgacgaaggt
gtcaccatcacctacgaccgcaaccaggcgctgtctcgcgaagacatgcagttcattacc
tgggagcacccgatggtccagggcggcatggacctggtgctgtccggttcgatgggcaac
accgcggtggcgctgatcaagaacaaggcactcaaacccggcaccgtgctgctcgaactg
ctgtacgtcagcgaagtggtcgctccgcgtgccctgcaactgggccgttacctgccaccg
gcggcactgcgctgcctgctcgacacgaacggcaacgacctggcctcgcgcgtatcgttc
gaaaccctcaacgaccagctcgagagcgtgccgaaggccagcgccaacaagttcatccag
gcccagcgcgatgtgctgacgccacggatcaacagtggtgaagccaagatcatgccgcgc
cacgccgaacgtgttgccgaagcgcagcgtcgcctggcggcggaaaccgacgaagagctg
gcacgcctgaccgcattgcaagcggtcaacccgagcgtgcgcgacagcgagatcgacgcg
gtgcgcaagcaacgtgaacaaggcctggcgatgctggataaagctgcgctgcgcctggaa
gcgatccgggtgttggtcgccgggtaa
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