Pseudomonas alkylphenolica: PSAKL28_12730
Help
Entry
PSAKL28_12730 CDS
T03238
Name
(GenBank) 23S rRNA m(5)U1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
palk
Pseudomonas alkylphenolica
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
palk03009
]
PSAKL28_12730
Enzymes [BR:
palk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PSAKL28_12730
Ribosome biogenesis [BR:
palk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PSAKL28_12730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
Cons_hypoth95
MTS
Methyltransf_23
Methyltransf_11
Methyltr_RsmB-F
RrnaAD
TRM5-TYW2_MTfase
PCMT
Methyltransf_15
Methyltransf_12
TPMT
Methyltransf_4
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
AIL60499
UniProt:
A0A077F9J7
LinkDB
All DBs
Position
1397328..1398686
Genome browser
AA seq
452 aa
AA seq
DB search
MSKSKRNSGLRFQPAGGSRTPQIPTGKKQRLRIERLAGDGRGIAFLDGRTWFVSGALAEE
EVEARVLNTHGKVVEARLERVFSASPERRQAPCKHFDRCGGCNLQHLAHADQLALKQRLL
AEQLQRVAGVAPERWAAPLSGPEFAYRRRARVAVRWDNKAKKLEVGFRAEASQDIVAIED
CPVLVQPLQSIMRHLPMLLQSLSKPQVVGHVELFSGTALALLLRHTAPLAEGDLARLQAF
CKEAGVQLWLQGEGEPYPLDAGQTLGFTLTPWNLELAYRPGDFVQVNAAVNTAMIEQALA
WLAPQADERVLDLFCGLGNFALPLARQAREVVAVEGVQAMVERAAANARSNDLHNTQFFQ
ADLSQPLTASGWAAGGFSAVLLDPPRDGAYEVVRKIADLGAKRLVYVSCNPATLARDTLE
LVRQGYRLKCAGILDMFPQTAHVEAMALFEAG
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagtaaacgcaacagcggcctgcgcttccagccggccggcggcagccgcacg
ccgcagatccccaccggcaaaaaacagcgcttgcgtatcgagcgcctggcgggggatggc
cgtggcattgcctttcttgacgggcgcacctggtttgtcagtggcgcgctggccgaggaa
gaggtcgaggcgcgcgtgctcaatacccacggcaaggtggttgaagcgcgtctggagcgg
gtgttcagcgccagcccggagcgtcgccaggcgccgtgcaagcatttcgatcgctgcggt
ggctgcaacctgcagcacctggcccatgccgatcagctggccctcaaacagcgcttgctg
gccgagcagctgcagcgggtcgccggtgtggcgcccgagcgttgggcagcgcctttgagc
gggccggagtttgcttaccggcgccgggcgcgggtggcagtgcgctgggataacaaagcg
aaaaaactcgaagtcggcttccgcgccgaagccagccaggacatcgtcgccattgaggat
tgtccggtactggtacaacccttgcagtcgatcatgcgtcacctgccgatgctgctgcag
agcttgagcaaaccgcaggtggtcggtcatgtcgagctgttcagcggtacggcactggcc
ttgctgttgcgccataccgcgccattggcggaaggcgacctggctcgcttgcaggcgttc
tgcaaagaagcaggtgtgcagctatggttgcaaggcgagggtgaaccttatccgcttgat
gccggtcagaccctcggtttcaccctgacaccgtggaacctggagctggcataccggccc
ggggatttcgtccaggtcaacgctgcggtcaacacagcgatgatcgagcaggcgctggcc
tggctggcgccgcaagccgacgagcgcgtacttgatctgttctgcggcctgggcaatttc
gccctgccgctggcccggcaggcgcgtgaagtggtggcggtggaaggtgtacaggcaatg
gtcgagcgagcagcggccaatgcacgaagcaacgatttgcataacacgcagttttttcag
gccgatttatcgcagcctttgaccgcctccggctgggccgctggaggcttttctgcggta
ctcttggatccaccgcgggacggcgcttatgaggtcgtgcgaaaaatcgcagacctcggg
gcgaaacgtctggtgtatgtatcgtgcaacccggcaaccctggcccgtgacacgctagag
ctggtcaggcagggttaccggttaaaatgtgccgggattctcgacatgtttcctcagacg
gcgcatgtcgaagccatggcgttattcgaagcgggctag
DBGET
integrated database retrieval system
