Pseudomonas alkylphenolica: PSAKL28_13340
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Entry
PSAKL28_13340 CDS
T03238
Name
(GenBank) mechanosensitive ion channel MscS
KO
K22044
moderate conductance mechanosensitive channel
Organism
palk
Pseudomonas alkylphenolica
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
palk02000
]
PSAKL28_13340
Transporters [BR:
palk02000
]
Other transporters
Pores ion channels [TC:
1
]
PSAKL28_13340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
UPF0239
Motif
Other DBs
NCBI-ProteinID:
AIL60560
UniProt:
A0A077F8D7
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All DBs
Position
complement(1467459..1469591)
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AA seq
710 aa
AA seq
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MPAFFRVLAVFLALFFLAPAHAAGLPSLLGGSKAQPEASEPLAQSLDEVIKNLENDQQRS
KLLADLKKLRDSTKQAQPAAEQGVLGLIGSTFAELEKQFSGDASPLTRWTRELELAQIEF
NARLVPLQEWPPILFGFATIIALWSLLAYALNWVSHRLRLRFGLTEELPQHPRTWDLVRF
ALRKLGPWLVALLITVYLSFALPSSLGKSMAMVLAYALVVGTCFSAICVIAFSLLDGPHR
HRALHILRHQAFRPLWLIGSFAAFGEAMNDPRMAGSLGDHLAHTLATLANILAALSTALF
ILRFRRPIAHLIRNQPLSRRLTRRALSDTIEILGTFWYLPALVLVGISLFATFISAGDTS
TALRQSLMCTVLLILCMVINGLVRRHGLKPQRANRRQAVYNERLRNFGYTLVHMAIWLVF
IELGLRVWGFSLIGFTEGEGHEVAMRLLGLAGTLIAAWLVWILADTAVHHALTRSRKGLA
NTRAQTMMPLIRNVLFVAIFIIAVIVALANMGMNVTPLLAGAGVIGLAIGFGAQSLVADL
ITGLFIIEDSLAIDDYVDVGGHLGTVEGLTIRTVRLRDIDGIVHTIPFSEIKSIKNYSRE
FGYAIFRVAIPHSMNIDQAISLIRDVGQKMRNDPLMRRNIWSPLELQGVESFESGSAILR
ARFKTAPIKQWEVSRAFNLALKRQLDEAGLDLATPRLSVQVITAGGASAD
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcttttttccgcgttctagctgtattcctggcgttattcttcctggccccggcc
cacgctgccggcctgccgagcctgcttggcggtagcaaagcccagcccgaggccagcgag
ccgctggcccagtccctggacgaagtcatcaagaacctggaaaacgatcagcagcgcagc
aagctgctggccgacctgaagaagctgcgcgacagcaccaagcaggcgcaaccggctgcc
gagcaaggcgtactgggcctgatcggcagcacgttcgccgagctggaaaaacagttcagt
ggagacgccagcccgctcacgcgctggacccgcgagctggaactggcccagatcgaattc
aacgctcgcctggttccactccaggaatggccccccatcctgtttggcttcgccaccatc
attgcgctctggagcctgctggcctatgccctgaactgggtcagccatcggctgcggctg
cgcttcggtctgacggaagaattgccgcagcacccacgcacctgggacctggtgcgcttt
gccttgcgcaagctcggcccgtggctggtggcgctgctgattaccgtgtacctgagcttc
gccctgccctcgtcactgggcaagtcgatggccatggtgctggcgtatgccctggtggtg
ggtacctgcttctcggcgatctgcgtcatcgccttttccctgctcgacggcccgcaccgc
catcgcgccctgcacatccttcgccaccaggcctttcgcccgctgtggctgatcggcagc
ttcgccgcctttggcgaggcgatgaatgatccgcgtatggccggttccctcggcgatcac
ctggcacacaccctggctaccctggccaacattctggcggcactgtcgactgcgctgttc
atcctgcgctttcgccgtcccatcgctcatctgatccgcaaccagccgctgtctcggcgc
ctgacccgccgggcgcttagcgataccatcgaaatcctcgggaccttctggtatttgcca
gcgctggtgctggttggcatctcgctatttgccacgttcatctccgcgggtgataccagc
accgccctgcgtcagtcgttgatgtgcacggtgctgctgattctgtgcatggtcatcaat
ggtctggtgcgtcgccatgggcttaaaccgcaacgggccaaccgccgccaggcggtgtat
aacgaacgcctgcgcaactttggctacaccttggtgcacatggcgatctggctggtgttt
atcgagctgggcttgcgggtctggggcttttccctgattggcttcaccgaaggcgaaggc
catgaggtagcgatgcgccttctcggcctggccggcaccctgatcgccgcctggctggtg
tggatcctcgccgacactgccgtgcaccatgccttgacccgctcgcgcaaaggcctggcc
aacacccgcgcgcaaaccatgatgccgctgatccgcaacgtgctgttcgtagcgattttc
atcattgcggtgatcgtcgccctggccaatatgggcatgaacgtcaccccgttgctggcc
ggtgccggggtgatcggcctggccatcggcttcggtgcccagtcactggtcgccgacctg
attaccggcctgttcatcatcgaagactcgctggcgattgacgactatgtcgatgtcggc
ggtcacctcggcacggtcgaaggcctgaccatccgcaccgtacgcctgcgcgatatcgac
ggcatcgtccacaccatcccgttcagtgaaatcaagagcatcaagaactactcccgcgag
ttcggctacgcgattttccgcgtggcgattccgcacagcatgaacatcgaccaggccatc
agcctgattcgcgatgtcggccagaagatgcgcaacgacccgttgatgcgccgcaacatc
tggtcgccactggagctgcaaggggtggagagtttcgaatcgggctcggcgatcctgcgc
gcacgcttcaagaccgcgccgatcaagcagtgggaagtgtcgcgggccttcaacctggcg
ctcaagcgtcagctcgatgaagccgggctggacctggcgacgccgcggttgtcggtgcag
gtgatcacggctggcggggcgagcgctgattag
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