Pseudomonas alkylphenolica: PSAKL28_13770
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Entry
PSAKL28_13770 CDS
T03238
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
palk
Pseudomonas alkylphenolica
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palk03032
]
PSAKL28_13770
03400 DNA repair and recombination proteins [BR:
palk03400
]
PSAKL28_13770
Enzymes [BR:
palk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PSAKL28_13770
DNA replication proteins [BR:
palk03032
]
Prokaryotic type
DNA Topoisomerases
PSAKL28_13770
DNA repair and recombination proteins [BR:
palk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PSAKL28_13770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AIL60603
UniProt:
A0A077F558
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All DBs
Position
1514777..1517404
Genome browser
AA seq
875 aa
AA seq
DB search
MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNADITVDELMEFIPGPDFPTAAIINGRQGIIEAYRTGRGRI
YMRARSTIEDIDKVGGRQQIVVTELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRIVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRVLNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA
VQVMVERAGADSCRPENLDEQYGLRDGKYFLSPEQAQAILDLRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSAERLMEVIREELELIRAEYGDVRRTEILDARLDLTLGDMIPEEDR
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYISHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDEGEYISTMLPVEEYTEGHFIFMATANGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDAGKVTRFKESDVRAMGRTAR
GVRGMRLAEGQKLISMIIPEEGSQILTASERGYGKRTEIGEFPEYKRGGQGVIAMVSNER
NGRLVGAVQVQDGEEIMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDETLVGLERV
QEPSEEEGDEDYEADADAVESPEAQAAGDEEAPQE
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgaactgagacagtcc
tacctcgactacgcgatgagcgtcattgtcgggcgtgcactgcccgatgcgcgtgatggc
ttgaagcccgtgcatcgccgcgttctgtatgcgatgagcgaactgggtaacgactggaac
aaaccgtacaagaaatccgcccgtgtggtcggtgacgtgatcggtaagtaccacccgcac
ggtgataccgcggtctacgacaccatcgtccggatggcccagccgttctcgctgcgttac
ctgctggtcgacggccagggcaacttcggttcggtggacggcgacaacgccgcagccatg
cgatacaccgaagtgcgcatgaccaagctggcccatgaactgctggcggacctgcacaag
gaaaccgtcgactgggtgcccaactacgacggcaccgagcagatcccggcggtcatgccg
accaagatccccaacctgctggtcaacggttccagcggtatcgccgtgggcatggcgacc
aacattccgccgcacaacctcggtgaagtcatcgacggctgcctggcgctgatcgacaac
gccgacattacggtcgatgaactgatggagttcatcccgggcccggatttcccgaccgcc
gcgatcatcaacggccgccagggcatcatcgaagcctaccgtaccggccgcggccgcatt
tatatgcgtgcgcgctccaccatcgaagatatcgacaaggtcggtggccgccagcagatc
gtcgttaccgagctgccttaccagcttaacaaggcgcgcttgatcgagaagatcgccgag
ctggtcaaggaaaagaaactcgaaggcattaccgagctgcgcgacgagtccgacaaagac
ggtatgcgtatcgtcatcgagctgcgtcgtggtgaggtacctgaggtcatcctcaacaac
ctctacgcccagacccagctgcaggcggttttcggcatcaacatcgttgccctgatcgac
ggccgtccgcgggtcctgaacctcaaggacctgctcgaggcgttcgttcgccaccgtcgc
gaagtggttacccgtcgcaccgtgttcgagctgcgcaaggcccgtgaacgtggtcacatc
cttgaaggtcaggcggttgccctgtccaacatcgacccggtcatcgccctgatcaaggct
tcgccgaccccgtcggaagccaaggaagcgctgatcagcacgccgtgggaatccagtgcc
gtgcaggtcatggtcgagcgcgccggtgccgactcctgccgtccggaaaacctcgacgag
cagtacggcctgcgtgacggcaagtacttcctgtcgccggaacaggcccaggccattctc
gacctgcgtctgcaccgcctgaccggccttgagcacgagaagctgctggccgagtaccag
gagatcctcaaccagatcggtgagctgatccgcatcctcaacagcgccgagcgcctgatg
gaagtgatccgcgaagagctggaactgatccgcgccgaatacggcgacgtgcgccgcacc
gaaatcctcgatgcgcgcctggacctgaccctgggtgacatgattccggaagaagaccgg
gttgtgaccatctcccacggcggctacgccaagacccagccgctggctgcctatcaggct
cagcgtcgcggcggtaaaggcaagtcggctaccggcgtcaaggacgaggactacatctcg
cacctgctggtcgccaacagccacaccacgctgctgctgttctccagcaagggcaaggtg
tactggctcaagacctacgaaattcccgaagcctcccgtgctgcgcgaggtcgaccgctg
gtcaacctgctgccgctggacgaaggcgagtacatctcgaccatgttgccggtcgaggag
tacaccgaaggtcacttcatcttcatggccaccgccaacggtaccgtgaagaagaccccg
ctggagtccttcagccgtcagcgcagcgtcggtctgatcgcgctggaactggacgaaggc
gacgtgctgatttccgcggccatcaccgatggcgagcgtgaggtcatgctgttctccgac
gccggcaaggtcactcgattcaaagagtccgacgtccgcgccatgggccgtaccgcccgt
ggtgtgcgcggcatgcgtctggccgaagggcagaagctgatctcgatgatcattccggag
gagggcagccagatcctcaccgcctccgagcgtggttatggcaagcgtaccgaaatcggc
gagttccctgagtacaagcgtggtggccagggcgttatcgccatggtcagcaacgagcgt
aacggtcgcctggtcggtgccgtgcaggtgcaggacggcgaggaaatcatgctgatttcc
gaccagggcaccctggtccgtacccgtgtcggcgaggtctccagcctgggtcgtaatacc
cagggcgtgaccctgatcaagctggccagcgacgagaccctggtgggtctggagcgggtc
caggagccatccgaagaggaaggcgacgaggactacgaggccgatgctgacgccgttgaa
tcaccagaggcccaggccgctggcgacgaagaggcgccgcaggaataa
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