Pseudomonas alkylphenolica: PSAKL28_15540
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Entry
PSAKL28_15540 CDS
T03238
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
palk
Pseudomonas alkylphenolica
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palk03400
]
PSAKL28_15540
DNA repair and recombination proteins [BR:
palk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSAKL28_15540
Archaeal homologous recombinant proteins
PSAKL28_15540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
MMR_HSR1
AAA_15
cobW
AAA_22
nSTAND3
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AIL60780
UniProt:
A0A077F8Y3
LinkDB
All DBs
Position
complement(1703151..1706798)
Genome browser
AA seq
1215 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LSNIGRETKLPEVDSDILTSDPRTLLRRGTGSGFAEVDFVGVDGRRYRARWEANRARDKA
NGKLQGSRQSLHDLDSDQLLSNQSKGEYKQLIEARLGLNFEQFTRAVMLAQSEFSAFLKA
DDKDRSELLEKLTNTAIYSQLGRRAYSKSKEAEEVHKALEDQAAGVMPMTPEARTDLDQR
YAQALERLKGEQAQLRQLELQRTWLTELQQLQNQVHSSNEQLLSAQQHSDSLQGERLNLV
RLEQLAPQRHQFARQQALSSQLSPLAASISALRQQHDELHTRQQQLHDLQHNAQQALNQA
LAEQSDSAPLLRQAFAEQNSVARLSQELGNCLALKQQAEQACSEGQQQLLNLAEQQRLSA
ERLDQISQQLAQSASLTGLSEAWNAYRDRLQQLMQLGNRLNQGRAELPGLQTRAEQASAA
LEQQRAAIALLYHEAQAEPEALAEQIGLLGELLQKNRQQQRQVEELNRLWSQQQELEQRL
SALRERQKIALKQREQLISEGLNGKNQLTAAEQALNVTRQLLERQRLARSQSVEELRAQL
QDDQPCPVCGSQEHPYHQPEALLQSLGRHDQDEEHNAQQAVDELKKKLDELRTQLGGVNG
QIKEYLHQQEQLSEQLQGLAPSLQAHLLYPALSDQEVSQRTAWLELQARRLNDDINRDEQ
RQNALLTLQKDAARLQQQLQAASEASQQASQHLQQQQQALGADQERLEQELASFATLLPA
DTLDELRREPAATFLRLDQQLAQRLDLLQRQKDEQLEHSERQQTLDKAQLQQQTRAQKQQ
ELQVQFAELERQQQQSQASLTSLLAGQPGAEQWQHHLEQAVEQARQQQAQAAQQLQDTQA
RLIELAAELKAKGERLSALEQEHAEVRGQIEQWRQGHPELDDSGLEQLLALDDSAVSQLR
QRLQDSEKALEQAHILLKERQQRLEQHQALASLEVPAEALEQALQTLQEQLSASEQACAE
LRAEQADDQRRQQANQALAEQIAQAYGEWQRWARLNALIGSATGDTFRKIAQGYNLDLLV
HHANAQLRQLARRYRLKRGGSLLGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLAS
MASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQ
VRRQGNGLSTVEVSG
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgccatccgcctgaaaaacctggcatccctggctggcccgtttgaaatc
gacttcactgccgagcccttggccagcgctggcctgttcgccatcaccggccctaccggc
gccggcaaaagcacgctgctcgatgccctgtgcctggccctgttcggcgcggtgccgcga
ctgagcaacatcggccgcgaaaccaagctgccggaagtcgacagcgacatcctcaccagc
gacccgcgcaccttgctacgccgcggcaccggcagcggttttgccgaagtcgacttcgtc
ggtgtcgatggccgtcgttatcgcgcacgctgggaagccaaccgcgcccgcgacaaagcc
aacggcaagctgcaaggcagccgccagagcctgcacgacctggacagcgaccaactgctg
agcaaccagagcaaaggtgaatacaagcaactgatcgaagcccgcctggggctgaacttc
gagcagttcacccgcgccgtgatgctggcccagagcgagttcagcgccttcctcaaggcc
gacgacaaagaccgcagcgagctgctggaaaaactcaccaatacggcgatctacagccag
ttggggcgtcgcgcctacagcaagagcaaagaagccgaagaagtccacaaggcccttgaa
gaccaggctgccggcgtcatgccgatgacgcctgaagcccgcaccgacctcgaccaacgt
tatgctcaggcgctggagcgcctcaagggcgagcaggcgcaactgcgtcagctcgaactg
caacgcacctggctgaccgagctgcagcagctgcaaaatcaggtacacagcagcaacgag
caactgctcagcgcccagcagcacagcgacagcctgcaaggcgaacgcctgaacctggta
cgccttgagcaactggccccgcaacgtcatcaatttgcccgtcagcaggcactgagcagc
cagctttcacccttggccgccagcatcagcgccttgcgccaacaacacgacgaactgcac
acgcgccagcaacagctgcacgacctacagcacaacgcccagcaggcattgaaccaggcc
ctggccgaacaaagcgacagcgcgcctttgctgcgccaggcctttgccgagcagaacagc
gtcgcccgcctgtcacaagagctgggcaactgcctggcgcttaaacagcaggccgagcaa
gcctgcagcgaaggccagcagcagttgctcaatctggctgagcagcagcgcctgagtgca
gaacgcctcgatcagatcagccaacagctggcccagagtgcatccctgaccggcctgagc
gaagcctggaatgcctaccgcgatcgcctgcaacagctgatgcaactgggtaaccgcctc
aatcaggggcgcgccgaactgcccggcctgcaaacccgtgccgagcaggcaagcgccgcc
ctcgagcaacagcgcgccgccatcgccctgctctaccatgaagcccaggctgaacccgaa
gccctggccgagcagatcggcctacttggcgagctgctgcagaaaaatcgccagcagcag
cgccaagtggaagagctcaaccggctgtggagccagcagcaagaactggagcaacgcctg
agtgccctgcgcgaacgccagaaaatcgccctcaagcagcgagaacagctgatcagcgaa
ggcctcaacggcaagaaccagctgaccgccgccgaacaagcgctcaatgtcacccgccag
ttgctcgaacgccagcgcctggcccgtagccagagtgtcgaagagctgcgcgcacaactt
caggatgaccagccctgcccggtgtgtggcagccaggaacatccctaccatcagcccgaa
gccctgctgcagagcctcgggcggcatgaccaggatgaagaacacaacgcccagcaggca
gtcgatgagctgaaaaagaagctcgacgaactgcgcacgcaactgggcggcgtcaacggt
cagatcaaggaatacctgcaccagcaggagcaactgtccgagcaactgcaaggcctggcg
ccgagcctgcaggcacacctgctctacccggcgctgtccgaccaggaagtcagccagcgc
acggcctggctggagctgcaggcccgccgcctgaacgatgacatcaaccgcgacgaacag
cgccagaacgccctgctgaccctgcaaaaagacgccgcccgcctgcagcagcaactgcaa
gccgcaagcgaagccagccagcaggccagccagcatctgcagcaacaacagcaagcccta
ggcgccgatcaagagcgtctggagcaggagctggcgagcttcgccacgttgctgcccgcc
gacaccctcgatgaactgcgccgtgagccggctgcaaccttcctgcgtctggaccagcaa
ctggcacagcgcctggacctgctgcaacggcaaaaagatgagcagctcgagcacagcgaa
cgccagcagaccctggacaaggctcagctccagcaacagacgcgggcacaaaagcagcag
gagctgcaggtgcagttcgccgagcttgaacgccaacagcaacagagccaggccagcctc
accagcctgctcgccgggcaacctggcgccgagcaatggcagcaccacctggagcaggcg
gtagagcaggctcgccagcaacaggcgcaagcagcccagcaattgcaggacacccaggca
cgcctgattgaactggcagccgaactcaaggccaagggcgagcgtttgagcgccctggaa
caggaacacgccgaggtacgcggccagatcgagcaatggcgccaggggcatcctgaactg
gatgacagcggcctggaacaattgctggccctggacgacagcgccgtcagtcagttacgt
cagcgcctgcaggacagcgagaaagccctggagcaagcgcatattctgctcaaggaacgc
caacagcgcctggagcaacatcaggccctggccagcctggaggtgcccgccgaggcgctg
gagcaagcactgcaaaccttgcaggaacaactgtcggccagcgaacaggcctgcgccgaa
ctgcgtgccgaacaggctgacgaccagcgccgtcaacaggccaaccaggccctggccgag
caaattgcccaggcctacggtgaatggcaacgctgggcgcggctcaatgccctgatcggc
tcggccaccggtgacaccttccgcaagatcgcccagggctacaacctcgacttgctggtg
catcacgccaatgcccagctgcgccagctggcccggcgctatcgcctcaagcgcggtggc
agcctgctgggtctgctggtgctggatacagagatgggcgacgagctgcgctcggtgcac
tcattgtccggtggcgagaccttcctggtgtcgctggccctggcgttgggcctggcgtcg
atggcttcgagcaccttgcgcatcgaatcgctgtttatcgacgaaggcttcggcagcctc
gatccggagtcgctgcaactggccatggacgcccttgatggcctgcaggcccagggccgc
aaggtcgcggtgatttcccatgtgcaggaaatgcacgagcgcatcccggtgcagatccag
gtgcgccgtcagggcaatggtttgagtacggtggaggtcagcggatga
DBGET
integrated database retrieval system
