Pseudomonas alkylphenolica: PSAKL28_16360
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Entry
PSAKL28_16360 CDS
T03238
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
palk
Pseudomonas alkylphenolica
Pathway
palk00071
Fatty acid degradation
palk00280
Valine, leucine and isoleucine degradation
palk00310
Lysine degradation
palk00362
Benzoate degradation
palk00380
Tryptophan metabolism
palk00410
beta-Alanine metabolism
palk00640
Propanoate metabolism
palk00650
Butanoate metabolism
palk00907
Pinene, camphor and geraniol degradation
palk00930
Caprolactam degradation
palk01100
Metabolic pathways
palk01110
Biosynthesis of secondary metabolites
palk01120
Microbial metabolism in diverse environments
palk01200
Carbon metabolism
palk01212
Fatty acid metabolism
Module
palk_M00087
beta-Oxidation
palk_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PSAKL28_16360
00650 Butanoate metabolism
PSAKL28_16360
09103 Lipid metabolism
00071 Fatty acid degradation
PSAKL28_16360
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PSAKL28_16360
00310 Lysine degradation
PSAKL28_16360
00380 Tryptophan metabolism
PSAKL28_16360
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PSAKL28_16360
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PSAKL28_16360
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PSAKL28_16360
00930 Caprolactam degradation
PSAKL28_16360
Enzymes [BR:
palk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PSAKL28_16360
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PSAKL28_16360
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PSAKL28_16360
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PSAKL28_16360
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AIL60861
UniProt:
A0A077FC10
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All DBs
Position
1802117..1804264
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFSDFEDLAVPTVAAINGIALGGGLE
MCLAADFRVMSSNAKIGLPEVKLGIYPGFGGTVRLPRIIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVAPELLQAAALDLIKRAISGEFDHKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTSVAESLIGLFLNDQEL
KRKAKAHDEIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDINEGAIALGLNEASKL
LGKRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENPKVKQAVLAEVEGQVK
EDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKNGKGFYAYETDKRGKP
KKVADAAVLEVLKPVVYEQREVTDEDIINWMMVPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGPLYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagcggcatcgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgtcttaccctgaacgaattg
cgtcaggccgtagacaccatcaaggccgacgcctcgatcaaaggcgtgattgtcagcagt
ggcaaggacgtgttcatcgtcggtgcggatatcactgagtttgtcgataacttcaagctg
cccgaggccgaactggtcgccggcaacctggaagccaaccggattttcagcgacttcgaa
gacctggccgtgccgaccgttgccgcgatcaacggcatcgccctgggcggtggtctggaa
atgtgcctggctgccgacttccgcgtgatgtccagcaatgccaagatcggtctgccggaa
gtcaagctgggtatctacccgggctttggcggtaccgtgcgcctgccgcgcatcatcggt
gccgacaacgccatcgagtggattgccgccggcaaggaaaaccgtgctgaagacgctctg
aaggtcggtgccgtcgatgccgtggtagcccctgagctgctgcaggccgccgcactggac
ctgatcaagcgcgccatcagcggcgagttcgatcacaaggccaagcgtcagccgaagctt
gagaagctcaagctcaacgccatcgagcagatgatgtcgttcgaaaccgccaaaggtttc
gttgcaggtcaagcaggcccgaactatccggcgccggttgaagcgatcaagagcattcag
aaggcggccaacttcggccgcgacaaggccctggaagtcgaagccgccggctttgtcaaa
ctggccaagacttcggttgccgagagcctgatcggcctgttcctcaacgaccaggaactc
aagcgcaaagccaaggcccacgacgaaatcgctcacgacgtgaagcaggctgccgtgctc
ggcgccggcatcatgggcggcggtatcgcctaccagtcggcggtcaagggcaccccgatc
ctgatgaaggacatcaacgaaggcgccattgcgctgggcttgaacgaagcttccaagctg
ctcggcaagcgcgttgaaaaaggccgtctgaccccggcgaaaatggctgaagcgctgaac
gcgattcgtccgactctgtcctacggcgacttcgccaacgtcgatatcgtcgttgaagct
gtggtcgagaacccgaaggtcaagcaagcggtactggctgaagtggaaggccaggtgaag
gaagacgccattctggcttccaacacctcgaccatctccatcaacctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaatccggtgcacatgatgccg
ctggtcgaagtcatccgtggtgagaagtccagcgaagtggcggttgccaccaccgttgcc
tacgccaagaagatgggcaagaacccgatcgtggtcaacgactgcccgggctttttggtc
aaccgtgtgctgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtcgac
ttcgtgcgtatcgacaaggtcatggaaaaattcggctggccgatgggcccggcctacctg
atggacgtggtcggtatcgacactggccaccacggccgtgacgtcatggccgaaggcttc
ccggaccgcatgaaggacgaccgtcgttcggccgtcgatgcgctctacgaagccaaccgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaaacgcggcaagccg
aagaaagtcgccgacgcggccgtcctcgaagtgctcaagccggtcgtctacgaacagcgt
gaagtcactgacgaagacatcatcaactggatgatggtgccgctgtgcctggaaaccgtt
cgttgcctggaagacggtatcgttgaaaccgccgccgaagccgacatgggcctggtctac
ggtatcggtttccctccgttccgtggcggtgcgctgcgttacatcgactcgatcggtgta
gccgaattcgttgccctggcagacaagtacgccgatctgggtccgctgtatcaccccacc
gcgaagctgcgtgaaatggccaaaaacggccagagcttcttcggttaa
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