Pseudomonas alkylphenolica: PSAKL28_18290
Help
Entry
PSAKL28_18290 CDS
T03238
Name
(GenBank) TIGR03549 family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
palk
Pseudomonas alkylphenolica
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
palk03009
]
PSAKL28_18290
Ribosome biogenesis [BR:
palk03009
]
Prokaryotic type
ribosomal protein modification factors
PSAKL28_18290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
AIL61053
LinkDB
All DBs
Position
2004900..2007095
Genome browser
AA seq
731 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQ
TRDIPTDNIRLSQNNIVDPENRYNQIFKIQVELPADISAKDRQGILRSIDRCTVKKVVQT
GPEFVIEEVDNLDANAQALLMLDPASDASTYIVGKDLPLEQTIANMSAILAGLGMKIEIA
SWRNIVPNVWSLHIRDAQSPMCFTNGKGATKESALASALGEFIERLNCNFFYNDQFWGEE
IANAAFVHYPDERWFKPGRKDALPAEILDGYCLEIYNPDGELRGSHLYDTNSGNEARGIC
SLPFVRQSDGEVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEL
ALPDVPQEVLAKYPAILAGIQGLEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDLPQPTFESHALTEPNNFVEHFIDSSGVVSWRF
FSAKADFEFVEWDFSGQGENSNAEEAATLFGILESMGKEAYMAVYEHLGATACRILVPGY
SEIYPVDDLIWDNTNKALFFREDILNLHRLDESELRALVERLEESELDDYTDITTLIGIE
FDDNTVWGQLTILELKLLTHLALQQFEEAKELVETFLQFNDNTVERGLFYQALNVVLEVQ
LDDDLELDDYVFNFRRMFGNERMDAVIGSVDGSVRFYGLTPTSMKLEGLDRHLRLIDSYK
KLHAARARTLV
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaactttctcgacaaccttcggcttgaagccaagtttgatgacttc
accgtggtcgccgatcagcctatccgctataaaggcgatggttcggcaccgggtccgttc
gattattttctggcgtcgtcggcgttgtgtgcggcttactttgtgaagttgtactgccaa
acgcgcgatattcccaccgataatattcgcctgtcgcaaaacaatattgttgatccggaa
aaccgttacaaccagatcttcaagatccaggtcgagctgccagccgatatctccgccaag
gatcgccagggcatcctgcgttccatcgaccgttgtacggtgaagaaggtggtgcagacc
gggcctgagtttgtgatcgaggaagtcgacaacctcgacgccaatgcccaggcattgctg
atgctggacccggcgtccgacgccagcacctatatcgtcggcaaggatctgccgctcgag
cagaccatcgccaacatgtcggcgattctcgccggcctgggcatgaagattgaaatcgcc
tcgtggcgcaacattgtccccaacgtctggtcgctgcatatccgcgatgcgcagtcgccg
atgtgttttaccaacggcaagggcgcgaccaaagaaagcgcgctggcttcggcgctgggc
gaattcatcgaacgactgaactgcaacttcttctacaacgatcagttctggggcgaagag
atcgccaacgcggcgtttgtgcattacccggacgagcgctggttcaagcctggccgcaaa
gatgcgctgccggcggaaatcctcgacggctactgcctggaaatctacaaccccgatggc
gagctgcgcggctcgcatctgtacgacaccaactccggcaatgaagcgcgtggcatctgt
tcgctgccttttgtgcgccagtcggacggcgaggtggtgtatttcccctccaacctgatc
gaaaacctgtacctgagcaacggcatgagcgccggtaacacgctggccgaagcgcaggtg
caatgcctgtcggaaatcttcgagcgcgcggtcaaacgcgaaattctggaaggtgaactg
gcactgccggatgtgccgcaggaggtgctggccaagtacccggcgatcctcgccggcatt
cagggtctggaagagcagggcttcccggtgctggtgaaggatgcgtcgctgggcggagaa
ttcccggtgatgtgcgtcaccttgatgaacccccgtaccggcggcgtatttgcctcgttc
ggcgcgcacccaagctttgaagtggcgctggagcgcagcctgacggaactgctccagggc
cgcagcttcgaaggcctgaacgacctgccgcagccgacgttcgaaagccacgcgctgacc
gagccgaacaactttgttgagcacttcatcgattccagcggtgtggtgtcgtggcgtttc
ttcagtgccaaagccgatttcgaattcgttgagtgggacttctccggccagggtgaaaac
tccaacgccgaagaagccgcgaccttgttcggcattctcgaaagcatgggcaaagaagcg
tacatggcggtgtacgaacacctcggcgcaacggcctgccgcattctcgtgccgggctat
tcggaaatttacccggtcgacgacctgatctgggacaacaccaacaaagcactgtttttc
cgcgaagacattctcaacctgcaccgccttgacgagagcgagctgcgcgcgctggttgag
cgtctggaagagagcgagctggatgactacaccgacatcaccacactgatcggcatcgag
ttcgatgacaacacggtctggggtcagttgacgattctggagttgaagctgctgacccat
ctcgccttgcagcagttcgaagaggccaaggaactggtggaaaccttcctgcagttcaac
gacaacaccgtcgagcgtggactgttctatcaggccctgaacgtggtgctggaagtgcag
ctcgacgacgacctggagctggacgactacgtgttcaacttccgccggatgtttggcaac
gagcggatggacgcggtgatcggctcggtggacggcagcgtgcgcttctatggcttaacg
cctacgagcatgaagctggaagggctcgacaggcacctgcggttgatcgacagctataaa
aagttgcacgcggcgcgggccagaacattggtttga
DBGET
integrated database retrieval system
