Pseudomonas alkylphenolica: PSAKL28_18320
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Entry
PSAKL28_18320 CDS
T03238
Name
(GenBank) polyamine ABC transporter periplasmic polyamine-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
palk
Pseudomonas alkylphenolica
Pathway
palk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSAKL28_18320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
palk02000
]
PSAKL28_18320
Transporters [BR:
palk02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PSAKL28_18320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
LigD_N
Motif
Other DBs
NCBI-ProteinID:
AIL61056
UniProt:
A0A077FCJ6
LinkDB
All DBs
Position
2011938..2012975
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AA seq
345 aa
AA seq
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MIRTLKFAALATGLLTASHGLAADLTIVSFGGANKEAQVKAFYKPWQQASGSKIISGEYN
GEMAKVKAMVDTRSVSWDAVEVESAELARGCDEGMFETLDPAQIGLDSKDFVPGAIQPCG
IGFLVYSTVLAYNASKLKEAPTGWQDFWDVERFPGKRGLRKLAKSTLEFALIADGVAPGE
VYTLLATEAGQDRAFAKLDQIKPHIQWWEAGAQPPQYLAAGDVVMSSVYNGRLSAEQRKT
YDLKIVWSGGLYEFDSWAIPRGASRQEKTREFIAFSLEPVQQKSFAEHIDYGAANLQAMD
LLDKARIAELPTAPENLAQQVPVDALFWADHGEHLEQRFNAWASR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggactctgaaattcgcagcgctggcaaccgggttgttgactgccagtcatggc
cttgcggccgatctcaccatcgtctccttcggtggcgccaacaaagaggcccaggtaaag
gccttctacaaaccctggcagcaagccagcggcagcaagattatttccggtgaatacaac
ggcgaaatggccaaggtcaaagccatggtcgacacccgcagcgtctcctgggatgcggtg
gaagtcgaatcggccgagcttgcccgcggttgtgacgaaggcatgttcgaaaccctcgac
ccggcgcagatcggtctcgacagcaaagacttcgtacccggtgccatccagccatgcggc
atcggtttcctggtgtattcgacggtactggcctataacgccagcaagttgaaagaagcg
cccaccggctggcaagacttctgggatgtcgagcgcttcccgggcaagcgcggcctgcgc
aaactggccaaatcgaccctggaattcgccctgatcgccgacggtgtagcgcctggggag
gtctacaccttgctggcgaccgaggcgggtcaggatcgcgcctttgccaaactcgaccag
atcaagccgcacattcagtggtgggaagccggcgcacagccgccgcagtacctcgcggcc
ggggatgtggtgatgagttcggtgtacaacggccgcctttcggctgagcaacgcaaaacc
tatgacctgaagatcgtctggtcgggcgggctctacgagttcgactcctgggccatcccg
cgcggtgcttcacgccaggagaaaacccgcgaattcatcgccttctcgctggagcctgtg
caacagaaaagctttgccgagcacatcgactacggcgccgccaacctgcaggcgatggac
ctgctcgacaaggcgcgcatcgccgaactgcccaccgcgccagagaacctcgcgcagcag
gtgccggtagatgcgctgttctgggcggaccatggcgaacacctggagcagcgtttcaac
gcctgggcttcgcgctga
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