KEGG   Pseudomonas alkylphenolica: PSAKL28_19780
Entry
PSAKL28_19780     CDS       T03238                                 
Name
(GenBank) type I restriction-modification system endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
palk  Pseudomonas alkylphenolica
Brite
KEGG Orthology (KO) [BR:palk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:palk02048]
    PSAKL28_19780
Enzymes [BR:palk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     PSAKL28_19780
Prokaryotic defense system [BR:palk02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   PSAKL28_19780
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like DEAD FlaF UvrD-helicase
Other DBs
NCBI-ProteinID: AIL61199
UniProt: A0A077FBM4
LinkDB
Position
2167326..2170508
AA seq 1060 aa
MSHIHHECELERHIVEQLAAAGWLVGKSADYDAARALFPDDVLGWLEESQPQAMAKLHAM
NGTGTLDVVLDRLVKQLENKVDGGTVNVLRYGFAVAGGGTLAMSQGLPEDDRNETVIQRY
ATNRLRVVPQLRYSLDKTDEIDLAFFINGIPVATVELKTDFTQSVQAAMQQYRMDRKPER
KSGGFEPLLTFKRGAVVHFAMSDSDIRMTTKLAGDSTFFLPFNRGNDGAAGNPPGDNDSY
PVSYLWKRVLQKDNWLHIFHRYVLQERKEAQDLNGKTYFKEGLIFPRFHQWEGVTKMIDA
VRIEGAGQPYLIQHSAGSGKTNTIAWTAHSLIRVRRPDGEPYFHSVIVVTDRQVLDQQLQ
DAIQQIEHQAGVVCAIDRQQSSLPKSQQLAKAMLDGVPIIVCTLQTFPYAQKAILGETSL
RDRRFAIIIDEAHSSTGGSTADDLRYVLTGQSEDEWDKLSKEERLSVWQSSRSRPGNASY
FAFTATPKHSTLSLFGRPRNAAQPVNQENPPAPFHLYTMQQAIEEGFILDVLKNYTGYNV
AFKIGSEFVDDKRVDEKSARRKLAKWLSLNPVNVGQKVELIVEHFRKNVAHLLGGQAKAM
VVTSSRAAAVKYHLALLDYCQRKGYDNVQAMVAFSGEVPNSDVQETGLPADHQFSETNLN
PGLNGRDMRKVFDTPDYRVMIVANKYQTGFDQPKLVAMYLDKKISGVEAVQTLSRLNRTF
PGKDKTYVIDFANEAEEILAAFKTFYRDAQVADIQDPNIVYDIKQRLDGMFIYEAAEVEA
FGEAIVNRNVTHQKLYSLTQSATDRFNGKLKTLNDGIDQWEKAWEAAHDNGDEKGMEYSD
VQRAEYCMGRDELMIFSESLTKFVRTYEYIAQLVEFGDPALEAFASYARLLRKRLKGVSA
EQVDLDDLKLSHYKIKKGEGLAGLSAVGEAPELYGITDNGLRDARDREKKYLTELIEKLN
NAFGKDITDTDQVAFAVHVSEKLRGDTIVMAQVQNNTMDQAMKADLPSKAIQAIASAMSS
HTSMATKLLSDESTRDVFLTVVYELLKKDAGADLLGSART
NT seq 3183 nt   +upstreamnt  +downstreamnt
atgagccacatccaccacgaatgcgaactcgaacgccatatcgttgagcaactggctgct
gctggttggttggtcggcaagtccgccgactatgacgcggcgcgggcgctgttccctgat
gatgtgctcggttggctggaggaaagccagccgcaggccatggccaagttgcatgccatg
aacggtactggcactctcgatgtggtgctggatcggctggttaaacaactggaaaacaag
gtcgatggcggaacggtgaatgtgctgcgttacggcttcgccgtggccggtggcggcacc
ttagccatgagccaggggttaccggaggatgatcgcaacgagacggtgattcagcgctat
gcgaccaaccgcctgcgcgtggtaccgcagctgcgttactcgttggacaagaccgacgag
atcgacctggccttctttatcaatggtattcccgtggctacggtggagcttaagaccgac
ttcacccagtcggtgcaggctgccatgcagcagtaccggatggaccgcaagccggagcgc
aagagtggcgggtttgaaccgctgctgaccttcaagcgtggtgcagtggtgcacttcgcc
atgagcgacagcgatatccgcatgaccaccaaactggccggggattcgactttctttctg
ccgttcaaccggggaaacgatggcgcggcgggtaatccacccggcgacaatgacagctac
ccggtgagctacctttggaagcgggtgctgcagaaggataattggctacacatcttccat
cgctacgtgcttcaggagcgcaaggaagcccaggatttgaacggcaagacctacttcaag
gaaggtttgattttcccgcgcttccatcagtgggaaggcgtaaccaagatgatcgacgcg
gtgcgcatcgagggtgccgggcagccttatctgatccaacacagcgctggctcgggcaag
accaataccattgcctggacggcgcattcgttgatccgcgtgcgtcgcccggatggcgag
ccgtatttccatagcgtgatcgtggtcactgaccgccaggtgctggatcagcagttgcag
gatgctatccagcagatcgagcaccaggcaggggtggtgtgcgccatcgaccgtcagcaa
tccagcctccccaagagccagcagttggccaaggcaatgctagacggcgtgccgatcatc
gtctgtaccctgcagacttttccctatgcacagaaggccattctaggtgaaaccagcctg
cgtgaccgtcgtttcgccatcattatcgacgaggcgcacagctccactggcggcagtacc
gccgatgacctgcgctatgtgctgaccgggcagagtgaggacgagtgggacaaactgagc
aaagaggagcgtttatcggtatggcagtcatcgcgtagccgaccgggcaatgccagctac
tttgcctttaccgccacgcccaagcattcgaccctaagtttgtttggccgcccgcgaaat
gcggcgcagccggtgaaccaggaaaatcctccggcaccgtttcacctttacaccatgcag
caggccatcgaggaaggctttatccttgatgtgctgaagaactacaccggctataacgtg
gcgttcaaaatcggcagcgagtttgtcgacgacaaacgtgtggacgagaagagtgcccgg
cgcaagctggccaagtggctgtcactgaatccggtgaacgtggggcagaaggtcgagctg
atcgtcgaacacttccgcaagaacgttgcacacttgctcggtggtcaggccaaggccatg
gtggtgaccagctcgcgtgccgctgcggtgaagtaccacttggcgctgctggactactgc
cagcgcaagggctacgacaacgtgcaggcgatggtggcgttctccggtgaggtgcccaat
agcgatgtgcaggaaaccggcctgcctgcggatcaccagttcagcgagaccaacttgaac
cccggcctcaatggccgcgatatgcgaaaggtgttcgacaccccggattaccgggtgatg
atcgttgccaacaagtaccagaccggcttcgaccaacccaagctggtggcaatgtacctg
gacaaaaaaatctcgggtgtggaggcagtgcagacgctgtcgcggttgaatcgaaccttc
cccggcaaggacaagacctacgtcatcgactttgctaacgaggcagaagagatcctggca
gcgttcaagaccttctaccgtgatgctcaagtggcagatattcaggacccgaacattgtc
tacgacatcaagcagcgcttggatggcatgttcatctatgaagccgctgaggtcgaggcg
tttggcgaagccatcgtgaatcgcaatgtcactcaccagaagctttattcgctgactcaa
tcagccaccgaccgtttcaacggcaagctaaagaccctcaacgatggcatcgaccagtgg
gaaaaggcctgggaggccgctcacgacaacggtgacgaaaaggggatggagtactccgac
gtacaacgggcggagtactgcatgggtcgtgatgaattgatgatcttcagcgagagcctg
accaagttcgtccgcacctatgagtacattgctcaactggtggagttcggcgaccctgcg
ctggaagctttcgccagctacgctcggctgctgcgtaaacgcttgaagggcgtcagcgcc
gaacaggtggatctggatgatctcaaactcagccactacaagatcaaaaaaggagagggg
ctggcagggctttcagccgtgggtgaggcacccgagctatatggcatcaccgataacggc
ttgcgcgacgcccgcgaccgggagaaaaaatacctcaccgagctgatcgaaaagctcaat
aacgctttcggcaaagacatcaccgatacagatcaagtggctttcgcagtgcatgtgtcc
gaaaagctgcgtggcgataccattgtcatggctcaagtgcagaacaacaccatggatcag
gcgatgaaggctgacctgccgagcaaagccatccaggccattgccagtgccatgagcagc
cacaccagcatggcgaccaagctgttgagcgacgagtccacgcgggatgtgttcctgacg
gtggtgtatgagttgctgaagaaagatgcgggggctgatctgctcggttcggcgcggact
taa

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