KEGG   Pseudomonas alkylphenolica: PSAKL28_23150
Entry
PSAKL28_23150     CDS       T03238                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
palk  Pseudomonas alkylphenolica
Pathway
palk00300  Lysine biosynthesis
palk00470  D-Amino acid metabolism
palk01100  Metabolic pathways
palk01110  Biosynthesis of secondary metabolites
palk01120  Microbial metabolism in diverse environments
palk01230  Biosynthesis of amino acids
Module
palk_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:palk00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PSAKL28_23150
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PSAKL28_23150
Enzymes [BR:palk01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     PSAKL28_23150
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC PP-binding Ala_racemase_N DUF2605
Other DBs
NCBI-ProteinID: AIL61528
UniProt: A0A077F7W3
LinkDB
Position
2566765..2568366
AA seq 533 aa
MKLSKELVIQAKATFGTPTYLYDEAVLRSSFNELRDALPDCVDIFYALKVNPNLSLVKLI
RSYGGNTEVCSLGELEIALKAGVAPQDIILLGPYKKPEEHRRALEVGVFAIVVESESELR
KLSALAGELGCDAPVAIRINPNFSAAGSPWKMGGRPTHFGIQEDTAVANFAEYLALPNIK
IKGIHVYNGTKILDAQSVYDNAAYILGLFRTLSERHKLDMRMVDVGGGLGIKYYENETEL
DTTQLKQLLAPLFNDFHQQFPRTRIILESGRFIAGKCGALLVTVDNIKENHGKTFAVTDG
GTNCHGAAAGSGQVLKRNFRIIKATGNNGAPLREYHISGPLCSPDDLLGRDVRLETLHEG
DVLAVTASGAYGPSASPTLFHSHGHPAEVVVSNNQLFLARARQTAVDIRDSHADVPLEAM
LGTAAAAEPAAEIQLATQRQLSDILRVVLKLPEGTIITADSHLRDDLGLDSLTSMELLIS
LEDDIEGFFVNPDTIVPGHFNTVATLAGYIDAHRQTRSVGRPLGVVEVQHERA
NT seq 1602 nt   +upstreamnt  +downstreamnt
atgaagctttccaaggaactcgtcatccaggcaaaagcgacgttcgggacaccgacctac
ctctacgatgaagcggtgctgcgcagcagtttcaacgagttgcgtgacgcattgccggac
tgcgtggatatcttctatgcgttgaaggtcaatcccaacctgtccctggtaaaactgatc
cggtcatacggtggtaacactgaggtctgctcgctgggcgaactggaaattgccctgaag
gcaggggtggcaccgcaggacattattttgctaggcccctacaagaagcctgaagagcat
cgccgtgccctcgaagtcggggtgttcgccatcgtcgtcgaatcggaaagcgagttgcgc
aagttgtctgccctggctggggagctgggctgcgacgcaccggttgcgattcgcatcaat
ccgaatttctcggctgccggctcaccctggaagatgggcgggcgacctactcacttcggt
atccaggaagacaccgcagtggccaacttcgccgagtacctggcgctgcccaacatcaag
atcaagggtattcacgtctataacggcaccaagatccttgatgcgcaatcggtctacgat
aacgccgcgtacattctcggcttgttccgcaccttgtctgaacgccacaaactggacatg
cgcatggtcgatgtgggtggcggcctgggtatcaagtactacgaaaacgaaacagagctc
gataccacccagctcaaacagttgcttgcgccgctgttcaatgatttccaccagcaattc
ccgcgtacgcgcatcatccttgagtcggggcgcttcattgccggcaagtgcggtgccttg
ctggtcacggtcgacaatatcaaggaaaaccacggcaagacctttgccgtcaccgatggt
ggcaccaactgccatggtgcggcagcgggcagtggtcaggtgctcaagcgcaacttccgc
atcatcaaggccaccggcaataacggtgcgccgctgcgcgaataccatatctccggaccg
ctctgtagtcccgatgacctgctcgggcgcgatgtgcgcctggaaaccctgcacgaaggc
gatgttctggccgtgaccgcctcaggtgcgtatggcccttcggcctcgccgaccctgttc
cacagtcatggtcacccggccgaagtggtggtcagcaacaaccagctgtttctcgccagg
gctcggcagacggccgtggacattcgcgacagtcatgccgatgtgccgcttgaagcgatg
ctcggtacagccgccgcagccgaacctgctgctgaaatccagcttgctacccagcgtcag
ctcagcgacatcctgcgcgtggtactgaagttgccggaaggcacgatcatcacggccgac
tctcacttgcgtgatgacctggggctggactcattgacctccatggagctgctgatcagc
ctggaggacgatatcgaaggctttttcgtcaacccggacaccattgttccggggcatttc
aataccgtggcgaccctggccggttacatcgatgctcatcgacagacccgctcggtgggg
cgcccgctgggcgttgtcgaggtgcagcatgagcgtgcgtga

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