Pseudomonas alkylphenolica: PSAKL28_23150
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Entry
PSAKL28_23150 CDS
T03238
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
palk
Pseudomonas alkylphenolica
Pathway
palk00300
Lysine biosynthesis
palk00470
D-Amino acid metabolism
palk01100
Metabolic pathways
palk01110
Biosynthesis of secondary metabolites
palk01120
Microbial metabolism in diverse environments
palk01230
Biosynthesis of amino acids
Module
palk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSAKL28_23150
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSAKL28_23150
Enzymes [BR:
palk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PSAKL28_23150
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
PP-binding
Ala_racemase_N
DUF2605
Motif
Other DBs
NCBI-ProteinID:
AIL61528
UniProt:
A0A077F7W3
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All DBs
Position
2566765..2568366
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AA seq
533 aa
AA seq
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MKLSKELVIQAKATFGTPTYLYDEAVLRSSFNELRDALPDCVDIFYALKVNPNLSLVKLI
RSYGGNTEVCSLGELEIALKAGVAPQDIILLGPYKKPEEHRRALEVGVFAIVVESESELR
KLSALAGELGCDAPVAIRINPNFSAAGSPWKMGGRPTHFGIQEDTAVANFAEYLALPNIK
IKGIHVYNGTKILDAQSVYDNAAYILGLFRTLSERHKLDMRMVDVGGGLGIKYYENETEL
DTTQLKQLLAPLFNDFHQQFPRTRIILESGRFIAGKCGALLVTVDNIKENHGKTFAVTDG
GTNCHGAAAGSGQVLKRNFRIIKATGNNGAPLREYHISGPLCSPDDLLGRDVRLETLHEG
DVLAVTASGAYGPSASPTLFHSHGHPAEVVVSNNQLFLARARQTAVDIRDSHADVPLEAM
LGTAAAAEPAAEIQLATQRQLSDILRVVLKLPEGTIITADSHLRDDLGLDSLTSMELLIS
LEDDIEGFFVNPDTIVPGHFNTVATLAGYIDAHRQTRSVGRPLGVVEVQHERA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttccaaggaactcgtcatccaggcaaaagcgacgttcgggacaccgacctac
ctctacgatgaagcggtgctgcgcagcagtttcaacgagttgcgtgacgcattgccggac
tgcgtggatatcttctatgcgttgaaggtcaatcccaacctgtccctggtaaaactgatc
cggtcatacggtggtaacactgaggtctgctcgctgggcgaactggaaattgccctgaag
gcaggggtggcaccgcaggacattattttgctaggcccctacaagaagcctgaagagcat
cgccgtgccctcgaagtcggggtgttcgccatcgtcgtcgaatcggaaagcgagttgcgc
aagttgtctgccctggctggggagctgggctgcgacgcaccggttgcgattcgcatcaat
ccgaatttctcggctgccggctcaccctggaagatgggcgggcgacctactcacttcggt
atccaggaagacaccgcagtggccaacttcgccgagtacctggcgctgcccaacatcaag
atcaagggtattcacgtctataacggcaccaagatccttgatgcgcaatcggtctacgat
aacgccgcgtacattctcggcttgttccgcaccttgtctgaacgccacaaactggacatg
cgcatggtcgatgtgggtggcggcctgggtatcaagtactacgaaaacgaaacagagctc
gataccacccagctcaaacagttgcttgcgccgctgttcaatgatttccaccagcaattc
ccgcgtacgcgcatcatccttgagtcggggcgcttcattgccggcaagtgcggtgccttg
ctggtcacggtcgacaatatcaaggaaaaccacggcaagacctttgccgtcaccgatggt
ggcaccaactgccatggtgcggcagcgggcagtggtcaggtgctcaagcgcaacttccgc
atcatcaaggccaccggcaataacggtgcgccgctgcgcgaataccatatctccggaccg
ctctgtagtcccgatgacctgctcgggcgcgatgtgcgcctggaaaccctgcacgaaggc
gatgttctggccgtgaccgcctcaggtgcgtatggcccttcggcctcgccgaccctgttc
cacagtcatggtcacccggccgaagtggtggtcagcaacaaccagctgtttctcgccagg
gctcggcagacggccgtggacattcgcgacagtcatgccgatgtgccgcttgaagcgatg
ctcggtacagccgccgcagccgaacctgctgctgaaatccagcttgctacccagcgtcag
ctcagcgacatcctgcgcgtggtactgaagttgccggaaggcacgatcatcacggccgac
tctcacttgcgtgatgacctggggctggactcattgacctccatggagctgctgatcagc
ctggaggacgatatcgaaggctttttcgtcaacccggacaccattgttccggggcatttc
aataccgtggcgaccctggccggttacatcgatgctcatcgacagacccgctcggtgggg
cgcccgctgggcgttgtcgaggtgcagcatgagcgtgcgtga
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