Pseudomonas alkylphenolica: PSAKL28_25540
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Entry
PSAKL28_25540 CDS
T03238
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
palk
Pseudomonas alkylphenolica
Pathway
palk00061
Fatty acid biosynthesis
palk00071
Fatty acid degradation
palk01100
Metabolic pathways
palk01212
Fatty acid metabolism
palk02024
Quorum sensing
palk04146
Peroxisome
Module
palk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PSAKL28_25540
00071 Fatty acid degradation
PSAKL28_25540
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PSAKL28_25540
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSAKL28_25540
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
palk01004
]
PSAKL28_25540
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
palk04147
]
PSAKL28_25540
Enzymes [BR:
palk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PSAKL28_25540
Lipid biosynthesis proteins [BR:
palk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PSAKL28_25540
Exosome [BR:
palk04147
]
Exosomal proteins
Exosomal proteins of breast milk
PSAKL28_25540
Exosomal proteins of breast cancer cells
PSAKL28_25540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AIL61752
UniProt:
A0A077F8G2
LinkDB
All DBs
Position
complement(2831058..2832695)
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AA seq
545 aa
AA seq
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MTQSLWAATYQSLGIVPRIEMGTEVSLVSALDQALLTYAGRAAFQVPQGKLSYAELDRQS
AALAAWLQNQLGVQRGDRIAVMLPNILAYPVVMLGVLRAGCVLVNANPLYTVRELEHQLH
DADCKAIFVYSGSTATLAQVLRNPALASVICVGDGLPGAGHGCLGLNDEQIDDALHLEQV
LAVGRQMQRTPVSLSADDLLFLQYTGGTTGLSKGAMLSHANLLANIAQYKAVMPSMLRPG
EEVLATAIPLYHIFALMVSLTYMTVGATNWLVANPRDMDGFIELLKQARPSVFMGVNTLY
AGLLAQPRLTEVDFSYLRLSIGGGAAIQAAVSERWLAMTGTFIREGFGLSETSPMVSFNP
EAITEFTATTGVPVPGTDVRLLDDDGRNAAAGAPGEICVKGPQVMQGYWRQPDANAQAFT
ADGYFRTGDIGTFDARGLLKIVDRKKDMIIVSGFNVFPNEVEEAASRHPGLLECACVGVP
DDKTGEAVCLYVVRRVGSSLEEGELSTHLREYLAAYKVPRRIVFVAELPKSGVGKILRRK
IRELA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagtcactgtgggcggccacttatcagtcgctgggcatcgtgccgcgaattgaa
atgggcacagaggtttcactggtgtcggcactggatcaggcattgttgacctatgccggt
cgcgcagcctttcaagtgccgcaaggcaagttgagttacgccgaactggatcgtcagtcc
gcagccctcgcagcctggttgcagaatcagctgggtgtacagcgcggcgaccgtattgca
gtgatgctgcccaatattctggcgtacccggtagtaatgctcggtgtgctgcgcgcgggt
tgcgtgctggtcaacgccaatccgctgtacaccgtgcgtgagttagagcatcagttgcac
gacgcagactgcaaggcgatttttgtatattccggcagcactgcaaccctggctcaggta
cttcgcaacccggcgctggcgagtgtcatctgcgtcggggacgggctgccgggcgccggg
catgggtgcctggggctgaacgacgagcaaatcgacgacgctctacacctggagcaggta
ctggccgtcggccgtcagatgcagcgtaccccggtatcgctaagcgcagacgacctgctg
tttcttcagtacacgggcggcactactggcctgtccaagggcgcgatgcttagccacgct
aacttgctggccaacatcgcccagtacaaggctgtgatgccatcaatgctgcgccccggc
gaagaagtactagctaccgcgatcccgctctatcacatcttcgccctaatggtcagtctc
acctacatgaccgttggcgccaccaattggctggtggccaacccgcgagacatggacgga
tttattgaattgctcaaacaggctcggccgagtgtgttcatgggtgtcaacacgctgtat
gccggcttactggcacaaccgcgcctgaccgaagtggatttcagttacttgcgattgtct
attggcggaggggcggcgatccaggcggcagtttccgagcgctggctggcaatgaccggt
acgttcatccgcgaaggctttggtttgagcgaaacctcgccgatggtgtcatttaacccg
gaagccattactgagttcacggcgaccaccggggtgccagtgccaggcaccgatgtgcgc
ttgctcgacgacgatggccggaatgccgcagcgggcgcgccgggggagatctgcgtcaag
gggcctcaggtcatgcaagggtactggcgccaaccggacgccaacgcccaggcctttacc
gccgacggctactttcgtaccggtgatatcggcacctttgatgcacgcggtctgttgaag
atcgtcgaccgcaagaaggacatgatcatcgtctcgggcttcaacgtgtttcccaatgaa
gtggaggaggccgcctctcggcatccagggctgcttgaatgcgcatgtgttggagtccct
gatgacaagaccggtgaagcggtctgcttgtacgtcgtgcgccgcgtcggcagctcgttg
gaggagggggaactgagcacgcaccttcgcgaatatctggcggcctataaggtgcctaga
cgtattgtgttcgttgccgagctacccaagtccggagtaggcaagattctgcgtagaaaa
attcgtgaattggcctga
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