Pseudomonas alkylphenolica: PSAKL28_31080
Help
Entry
PSAKL28_31080 CDS
T03238
Name
(GenBank) transposase, IS4
Organism
palk
Pseudomonas alkylphenolica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nterm_IS4
DDE_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
AIL62284
UniProt:
A0A077FE93
LinkDB
All DBs
Position
complement(3430623..3431954)
Genome browser
AA seq
443 aa
AA seq
DB search
MSVQQDLLDLGDLFNFCDLSTFTQNIPIEWVASALDLSSQATIRRRRLPADQVLWLVLGM
ALFRDEPVHEVARRLNICSQGLASDHLLARSGVTEARKRLGADPVEWLFRKSGNQWGAER
YDDDAWHELQVFAVDGALLRTPDTPELRDHFGSGNTLSERQTPFPMLRLVAPMNVRSHVI
LDAQMSPYRRSEMRLADEFLQQIPDHSVTLFDKGFWGAELLSSLSSSGTHRHWLIPAKKG
LVCEEVVRYSQHDRLVRMKVSPQARKRNPTLPSHWEVREVSYEIQGKVKTVMTSLPAETY
TTKAVAKLYQERWEIELGFRDIKSSMQQNAMTLRSKKVELIYQEVWGLLLAYNVIRREAS
QAAVAFGRAPSDIRFKPACQYIAVQLIVMAAANPISATGRRLAELRAGIGGLFLDHRPRP
SRPRTVKISKPRFPVDRKAAPLK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcaacaggacctgctcgacctcggcgaccttttcaacttctgcgacctgagc
actttcacccaaaacattcccattgaatgggtcgcgtctgcactggatttgtcgagtcag
gcgaccattcgccgacggcgcctgcccgctgatcaagtgctttggctggtgctcggcatg
gccttatttcgtgacgagccggttcacgaggtggccagacgtttgaacatctgctcccaa
ggcctggcctcagaccacttgctggcccgcagtggtgtaaccgaagctcgtaaacggctc
ggcgccgatcctgttgagtggttattccgcaagtccggcaaccaatggggtgcagagcgt
tatgacgatgatgcctggcatgaactgcaggtcttcgcggtggacggtgcgcttttgcgc
accccggatacgcccgagctgcgagatcacttcgggtcgggaaatactctgagcgaacgc
cagacaccgtttccgatgctgcgcctggtagcgccaatgaatgtgcgttcgcacgtgatc
ctggatgctcaaatgagcccttaccgacgcagtgaaatgcgcttggccgacgagtttttg
cagcagattcccgaccattcggtgacgctgttcgacaaagggttctggggcgccgagctg
ctgtcgagtctgagcagttcgggcacccaccgtcattggttgatcccggcaaaaaaagga
ctggtctgtgaggaggtggtccgttacagccagcacgaccgtttggtgcgtatgaaagtc
tcgccgcaggccagaaagcgaaatccgacgcttccatcgcactgggaagtacgcgaagtc
agctatgaaattcaaggcaaagtgaagaccgtcatgacgtccttgccggccgagacctac
accaccaaggccgttgccaagctttatcaggaacgctgggagatcgagctgggcttcagg
gacatcaagagttcgatgcaacagaacgccatgaccttgcgcagtaaaaaagtcgagctg
atttatcaggaggtgtggggacttttgctggcttacaacgtaattcgtcgggaagccagt
caggcagcggtggcgtttggccgagcgccctcagacatccgtttcaaaccggcttgtcag
tacatcgcggtgcaattgattgtgatggcagcggccaacccgatttcagccacagggaga
cgattggcagagttaagggcaggtatcggaggattgtttctggatcaccgtccaaggcct
tcgaggccaaggacggtgaagatctcaaaaccccgatttccagtagaccgtaaggctgct
ccgcttaagtga
DBGET
integrated database retrieval system
