Pseudomonas alkylphenolica: PSAKL28_35540
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Entry
PSAKL28_35540 CDS
T03238
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
palk
Pseudomonas alkylphenolica
Pathway
palk03030
DNA replication
palk03430
Mismatch repair
palk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSAKL28_35540
03430 Mismatch repair
PSAKL28_35540
03440 Homologous recombination
PSAKL28_35540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palk03032
]
PSAKL28_35540
03400 DNA repair and recombination proteins [BR:
palk03400
]
PSAKL28_35540
Enzymes [BR:
palk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSAKL28_35540
DNA replication proteins [BR:
palk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSAKL28_35540
DNA repair and recombination proteins [BR:
palk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSAKL28_35540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
T2SSG
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AIL62706
UniProt:
A0A077FHN0
LinkDB
All DBs
Position
complement(3887910..3888659)
Genome browser
AA seq
249 aa
AA seq
DB search
MEIQSNRSVVLDTETTGMPVTDGHRVIEIGCVELMGRRLTGRHFHVYLQPDRESDEGAIG
VHGITDAFLVDKPRFAEVADEFFDFIQGAQLIIHNAAFDVGFINNEFALIGQQDRADISQ
HCTILDTLMMARSRHPGQRNSLDALCKRYGIDNSGRELHGALLDSELLADVYLSMTGGQT
SLSLAGQGADGEENGEESRGSEIRRLIGRQPGRIIPATEQELEAHLARLEAIAKSAGGPA
LWQQLSEAN
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
gtggagattcagagcaacaggtcggtcgtcctcgacaccgaaaccacgggtatgccggtt
accgacggtcaccgggtcatcgagatcggttgtgtcgaactgatgggccggcgcctgacc
gggcggcacttccacgtctatctgcaaccggatcgcgaaagtgacgaaggcgccatcggc
gtacacggtatcaccgacgcctttctggtcgacaaaccgcgttttgccgaagtggccgat
gaattcttcgacttcatccagggcgctcagttgatcatccacaacgcggcgttcgacgtt
ggcttcatcaacaacgagttcgcgttgatcggccagcaagaccgcgccgatatctcccag
cattgcaccatcctcgataccctgatgatggcccgctcgcggcatccggggcagcgcaac
agcctcgatgcattgtgcaagcgttacggcatcgacaactccggccgtgagttgcacggc
gcgttgctcgactcggagttgctggccgacgtctacctgagcatgaccggcggccagacc
agcctgtcactggccgggcagggcgccgatggcgaggaaaacggcgaagaaagccgtggc
agtgaaatccgtcgcctcatcggtcgtcagccggggcgcatcattccggctaccgagcag
gaactggaagctcatctggcgcgcctggaagccattgccaaatcggcgggtggtccggcg
ttgtggcagcaattgtccgaagccaactga
DBGET
integrated database retrieval system
