Pseudomonas alkylphenolica: PSAKL28_36660
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Entry
PSAKL28_36660 CDS
T03238
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
palk
Pseudomonas alkylphenolica
Pathway
palk03030
DNA replication
palk03430
Mismatch repair
palk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSAKL28_36660
03430 Mismatch repair
PSAKL28_36660
03440 Homologous recombination
PSAKL28_36660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palk03032
]
PSAKL28_36660
03400 DNA repair and recombination proteins [BR:
palk03400
]
PSAKL28_36660
Enzymes [BR:
palk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSAKL28_36660
DNA replication proteins [BR:
palk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSAKL28_36660
DNA repair and recombination proteins [BR:
palk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSAKL28_36660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_5
AAA_22
ResIII
AAA_14
AAA_16
TIP49
AAA_18
PIF1
AAA_30
AAA_2
AAA_19
TsaE
nSTAND3
AAA_7
DUF3646
Rad17
SKI
Herpes_Helicase
zf-CXXC
AAA_24
HasA
Motif
Other DBs
NCBI-ProteinID:
AIL62818
UniProt:
A0A077FC07
LinkDB
All DBs
Position
complement(4023406..4025460)
Genome browser
AA seq
684 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLSHVLGAENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLAADVRAM
LGTLDHGQVYGVLQALLEGDARALLEAVRHLAEQGPDWSGVLAEMLNVLHRVAIAQALPE
AVDNGQGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADADDAPTPVLKPVGISQATADSASAVAAASAAAPAMIAAPAVEPAPVAAPEPVAVTQPE
PEPEPAPTPVEVKAEEPEPVVDLPWNDPAPVQPVAEPEVAPAAPEPVVESPQPAPVQAVV
RQDAPPHDDSIGYSPAGMERDDEPPLDEDYYEPEMDPASYSYLDELAIEHVHEEAPTAAP
EPLPAAMPATGLALQWLELFPQLPISGMTGSIAANCTLIAAEGDDWLLHLDPAHSALFNA
TQQRRLNDALNQHFGRTLKLSIELIRPEQETPAQAAARKRAERQGEAEASIEADPLIQQM
IKQFGAMVRHDTIEPVDAPVTQGE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctcaaggctttgatcaacgcactggacaaccagcgcctgcaccatgcc
tacctgtttaccggtactcgcggcgtgggcaagactaccatcgcgcgaatcatcgccaaa
tgcctgaactgtgaaaccggcatcacctcgaccccctgcggcacctgttcggtgtgccgg
gaaatcgacgagggccgtttcgtcgacctgatcgagatcgacgccgccagtcgcaccaaa
gtcgaagacacccgcgagctgctcgacaacgtgcagtacgcgccgagccgtgggcgcttc
aaggtctacctgatcgacgaagtgcacatgctctccagtcactcgttcaacgccttgctc
aagacgctggaagagccgccgccctacgtcaagttcatccttgccaccactgatccacag
aagctgcccgcgaccatcctctcgcgctgcctgcagttttccctgaagaacatgaccccc
gagcgggtggtcgagcatctgagtcatgtgctcggtgctgagaacgtcccgttcgaagac
gacgcgctgtggctgcttggccgcgctgccgatggctcgatgcgcgatgccatgagcctg
accgatcaggccattgctttcggtgaaggcaaggtattggccgccgatgtgcgggccatg
ctgggcacgctcgatcatggccaggtctatggcgtcttgcaggcgctgctcgaaggcgac
gcacgggccttgctcgaagcggtacgccacctggccgagcaggggccggactggagcggc
gtgctggccgagatgctcaatgtgctgcatcgcgtcgccattgcccaggccctgcctgaa
gccgtggacaacggccagggcgatcgcgaccgggtattggccctggcccaggcgctgccg
gccgaggacgtacagttctactaccagatgggcttgatcggtcgtcgtgacctgccgctg
gctccggatccgcgcggcggcttcgagatggtgctgttgcgcatgctggcgttccgtccc
gccgatgccgatgacgcaccgacgccggtactaaagccggtggggatcagccaggccaca
gctgattcggcaagtgcggtggcagcagcgagtgcagctgcgcctgcgatgattgctgcg
ccggctgtcgagcctgcgccggttgctgctcctgagccggtagctgttacccagcctgag
ccggaacctgagcctgcgcccacgccagtcgaggtcaaagctgaagagcctgagccggtt
gtcgacctgccctggaacgatccagccccggtccagcctgttgccgagcccgaggttgca
cctgctgcgcccgaacctgtagtcgaatcgccgcaaccggcgccagttcaggcggtggta
cgccaggacgcaccgcctcacgacgacagcatcggctacagcccggcgggcatggagcgt
gacgacgagccgccgctggacgaggattactacgagccggagatggatccggccagctac
agttacctggatgagctggcgatcgagcatgtgcacgaagaagcgccgaccgccgctccc
gagccgttgccagcggccatgccggccaccggcctggctttgcaatggctggaattattc
ccgcagttgccgatctccgggatgaccggcagtatcgccgccaactgtaccctgattgcc
gccgaaggcgatgactggttgctgcacctggatccggcccacagtgcgctgttcaacgct
actcagcagcgccgcctgaacgatgccctgaaccagcatttcgggcgcacgctgaagctg
tccatcgagctgattcgcccggagcaggaaaccccggcccaggcggcggctcgcaagcgt
gccgagcgtcagggtgaggcagaggcttcgattgaggctgacccgctcatccagcagatg
atcaagcagtttggtgccatggtgcgacacgataccattgagcctgtagacgccccggta
acccagggcgaatga
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