Pseudomonas alkylphenolica: PSAKL28_38950
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Entry
PSAKL28_38950 CDS
T03238
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
palk
Pseudomonas alkylphenolica
Pathway
palk00061
Fatty acid biosynthesis
palk00071
Fatty acid degradation
palk01100
Metabolic pathways
palk01212
Fatty acid metabolism
palk02024
Quorum sensing
palk04146
Peroxisome
Module
palk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PSAKL28_38950
00071 Fatty acid degradation
PSAKL28_38950
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PSAKL28_38950
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSAKL28_38950
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
palk01004
]
PSAKL28_38950
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
palk04147
]
PSAKL28_38950
Enzymes [BR:
palk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PSAKL28_38950
Lipid biosynthesis proteins [BR:
palk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PSAKL28_38950
Exosome [BR:
palk04147
]
Exosomal proteins
Exosomal proteins of breast milk
PSAKL28_38950
Exosomal proteins of breast cancer cells
PSAKL28_38950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF3710
DUF599
Motif
Other DBs
NCBI-ProteinID:
AIL63045
UniProt:
A0A077FEX3
LinkDB
All DBs
Position
complement(4275325..4277022)
Genome browser
AA seq
565 aa
AA seq
DB search
MIENFWKDKYPAGVAAQINPDEYPNIQAVLKQSCQRFADKPAFSNLGKTLTYGQLYELSG
AFAAYLQQHTDLQPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTARELEHQFND
SGAKALVCLANMAHLAEKVVPKTQIKHVIVTEVADMLPPVKRLLINSVIKYVKKMVPAYH
LPKALKFNDVLSKGAGQPVKEASPDSNDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCR
ALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNENFRKLDFSNLKITLSGGMALQMSVAERWKAVTGCAICEGYGM
TETSPVAAVNPAEQNQIGTIGIPVPSTLCKIINDEGVELPLGEVGELCVKGPQVMKGYWQ
RLDATTEILDSEGWLKTGDIALIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPG
VLQCAAIGVPDEKSGEVIKLFIVARPGVTLTKDQVMEHMRANVTGYKVPRFIEFRDALPT
TNVGKILRRELRDEELKKLGLKKIA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaatttttggaaggataagtacccagccggggttgcggcgcaaatcaacccc
gatgagtacccgaatatccaggcagtattgaaacagtcctgccaacgctttgctgacaaa
ccagcctttagcaacctgggcaaaacactgacctacggccagctgtacgagttgtcgggg
gccttcgccgcctacctgcagcagcatactgacctgcagcccggcgatcgtatcgccgtg
caactgcccaacgtgctgcaatatccggttgccgtattcggcgctatgcgtgccggcctg
atcgtggtgaacaccaacccgctgtataccgcacgggagctggagcaccaattcaatgac
tccggtgccaaagcgctggtgtgtctggccaacatggcgcacctggccgaaaaggtcgtg
cccaagacccagatcaaacacgttattgtcaccgaagtggccgatatgctgccaccggta
aagcgcctgttgatcaacagcgtgatcaagtacgtgaaaaaaatggtcccggcctaccac
ttgcccaaggcgctgaagttcaatgatgtattgagcaaaggcgccggccagccggtgaaa
gaagcgagccccgacagcaatgatgtggccgtgttgcagtacaccggtggcaccaccggg
gtggccaagggcgcgatgcttacccaccgtaacctggtggccaatatgctgcagtgccgg
gcgctgatgggctccaacctcaatgaaggttgcgagatcctgatcaccccgttgccgctg
taccacatctatgccttcacctttcattgcatggcaatgatgctgatcggcaaccacaac
atcctgatcagcaacccgcgcgacttgccggcgatggtcaaggagttgtcgaagtggaag
ttcagcggctttgtcgggctgaacaccttgttcgttgccctgtgcaacaacgaaaacttc
cgcaagctggatttctcgaatctgaaaatcaccctgtcgggcggcatggccctgcagatg
agtgtcgccgagcgctggaaagcagtgactggttgcgccatctgcgaaggttacggcatg
accgaaaccagcccggtggcggcggtcaacccggccgagcagaaccagatcggtaccatc
ggtattccggtgccttcgaccctgtgcaagatcatcaatgatgagggtgtcgaactgccg
ctgggtgaagtcggtgaactgtgcgtcaagggcccgcaagtgatgaagggctactggcag
cgcctggatgcgaccaccgagatcctcgacagcgaaggttggttgaagaccggtgacatc
gccctgatccagcctgacggctacatgcggattgtcgatcgcaagaaagacatgattctg
gtgtccggattcaacgtataccccaacgagcttgaagacgtgctggctgcgctgccgggc
gtgttgcagtgtgcagccatcggcgtgccggacgagaagtccggtgaagtgatcaagctg
ttcatcgttgcacggcctggcgtgaccctgaccaaagatcaggtgatggagcacatgcgt
gccaatgtcaccggctacaaggtgccgcgtttcatcgagttccgtgatgcgctgccgacc
accaacgtcggcaagatcctgcgtcgtgagctgcgtgatgaagagctgaaaaagctgggt
ctgaagaagatcgcttga
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