Pseudomonas alkylphenolica: PSAKL28_40570
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Entry
PSAKL28_40570 CDS
T03238
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
palk
Pseudomonas alkylphenolica
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
palk03009
]
PSAKL28_40570
Enzymes [BR:
palk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PSAKL28_40570
Ribosome biogenesis [BR:
palk03009
]
Prokaryotic type
ribosomal protein modification factors
PSAKL28_40570
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
AIL63204
UniProt:
A0A077FGP9
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All DBs
Position
4445482..4446819
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AA seq
445 aa
AA seq
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MSTTPAPTTPKVGFVSLGCPKALVDSERILTQLRMEGYEVVPTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGSIRDVHPSVLAVTGPQQYEQVVNAVHEVVP
PRQDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGEVLSE
AERLVKAGVKEILVISQDTSAYGVDVKYKTDFWNGRPVKTRMLELCEALSSLGAWVRLHY
VYPYPNVDDIIPLMAAGKILPYLDIPFQHASPKVLKSMKRPAFEDRTLARIKKWREQCPQ
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLEVVPDEIK
QERWDRFMAHQQAISSARLQLRIGREIDVLIDEVEEEGSVGRSYFDAPEIDGNVFIDGNH
GFKPGDTVRCRVTDADEYDMWAEPI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccactcctgcgccaaccacgccaaaggtcggcttcgtttccctaggctgcccc
aaagccctggtcgactccgagcgcatcctgacccagctgcgcatggaaggctatgaagtc
gtgcccacctatcaggatgccgatgtggtggtggtcaacacctgtggcttcatcgacagc
gccaaggccgagtcgcttgaagtgatcggcgaagccatcaaggaaaacggcaaggtcatc
gtcaccggttgcatgggtgtcgaggaaggcagcatccgtgacgtgcacccgagcgtactg
gccgtgaccggcccgcagcagtacgagcaggtggtcaacgccgtgcacgaagtggttccg
ccgcgtcaggatcacaacccgctgatcgacctggtgccgccacagggcgtcaagctgacc
ccgcgccactacgcctacctgaagatttccgaaggctgcaaccacagctgcagcttctgc
atcatcccgtcgatgcgcggcaagctggtcagccgtccggtcggcgaagtcctcagcgaa
gccgagcgcctggtcaaggccggggtcaaggagatcctggtgatctcccaggacaccagc
gcctatggcgtcgacgtcaaatacaagaccgacttctggaacggccgcccggtcaagacc
cgcatgctcgaactgtgcgaagcactgagcagcctgggcgcctgggttcgcctgcactac
gtttatccgtacccgaacgtcgacgacatcatcccgctgatggctgccggcaagatcttg
ccgtacctggacatcccgttccagcacgccagcccgaaagtactcaagtcgatgaagcgt
ccggcctttgaagaccggaccctggcgcgcatcaagaagtggcgcgaacagtgcccgcag
ctgatcatccgctccaccttcatcgtcggcttcccgggcgaaaccgaagaagacttccag
tacctgctcgactggctgaccgaagcccagctcgaccgcgtcggctgcttccagtactcg
cccgtcgaaggcgcaccagccaacgacctgggcctggaagtcgtccccgatgagatcaag
caagagcgctgggatcgtttcatggcccaccagcaggcgatcagcagtgcccgcctgcaa
ctgcgcatcggccgcgaaatcgacgtgctgatcgacgaagtggaagaagaaggctcggta
ggccgcagctacttcgacgccccggagatcgacggcaacgtgttcatcgatggcaaccac
ggcttcaagccgggtgacaccgtacgctgccgggtcaccgacgccgacgagtacgacatg
tgggctgaaccgatctga
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