Pseudomonas alkylphenolica: PSAKL28_40770
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Entry
PSAKL28_40770 CDS
T03238
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
palk
Pseudomonas alkylphenolica
Pathway
palk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PSAKL28_40770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palk03400
]
PSAKL28_40770
DNA repair and recombination proteins [BR:
palk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PSAKL28_40770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
AIL63224
UniProt:
A0A077FGQ7
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Position
4461277..4463856
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AA seq
859 aa
AA seq
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MNKAISDFSAHTPMMQQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARG
QSAGQSIPMCGIPFHAAEGYLAKLVKLGESVVICEQIGDPATSKGPVERQVVRIITPGTV
SDEALLDERRDNLIAAVLGDERLFGLAVLDITSGNFTVLEIKGWENLLAELERINPVELL
IPDDWPQGLPAEKRRGARRRAPWDFDRDSARKSLCQQFATQDLKGFGCEKLTLAIGAAGC
LLGYAKETQRTALPHLRSLKHERLDDTVVLDGASRRNLELDVNLAGGRDNTLQSVIDRCQ
TAMGSRLLTRWLNRPLRDLKVLQARQGSIRCLLDSYRFEKLQPQLKEIGDLERILARIGL
RNARPRDLARLRDALGALPELQNAMAELEAPHLARLAAITGTYPELADLLEKAIIDNPPA
VIRDGGVLKTGYDSELDELLSMSENAGQFLIDLEAREKTRTGLANLKVGYNRVHGYFIEL
PSKQAEQAPADYIRRQTLKGAERFITPELKVFEDKALSAKSRALAREKMLYDALLETLIG
HLAPLQDTSAALAELDVLSNLAERALNLDLNCPSFVDEPCMRISQGRHPVVEQVLTTPFV
ANDLALDDNTRMLVITGPNMGGKSTYMRQTALIVLMAHIGSFVPAASCELSLVDRIFTRI
GSSDDLAGGRSTFMVEMSETANILHNATDRSLVLMDEVGRGTSTFDGLSLAWAAAERLAQ
LRAYTLFATHYFELTVLPESEPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQL
AGVPTPVIQRAREHLGRLETASLPHEMPAVPKGAQDVPHQSDLFASLPHPAIEKLGKLDL
DNMTPRQAIEMLYTLKTLL
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaatttccgatttctccgcacacaccccgatgatgcagcagtactggaag
ctgaaaaaccagcatccggatcaactgatgttctaccgcatgggcgacttctacgaaatc
ttctatgaagatgcgaagaaggccgcaaaactcctggacattaccctgactgcccgcggg
caatcggcgggccagtcgatccccatgtgcggtatccccttccacgcggccgagggctac
ctggccaagctggtaaagctgggcgaatcggtggtgatctgcgaacagatcggcgacccg
gccaccagcaagggcccggtcgagcgccaggtggtgcgcatcatcaccccgggcacggtc
agcgacgaggcgctgctcgatgagcgccgcgacaacctgatcgccgccgtactgggtgac
gagcgcctgttcggcctggccgtgctggatatcaccagcggcaacttcaccgtgctggag
atcaagggctgggaaaacctgctggccgagcttgaacgcatcaatccggtcgagctgctg
atcccggatgactggccacaaggcctgccggccgaaaaacgccgtggcgcccgccgccgt
gcgccgtgggacttcgaccgcgattcggcacgcaagagcctctgccagcagttcgcaacc
caggacctcaaaggcttcggctgcgagaagctgaccctggccatcggcgctgccggttgc
ctgctgggctacgccaaggaaacccagcgcactgccctgccgcacctgcgcagcctcaag
catgaacgcctggacgataccgtggtgctcgacggcgccagccgccgtaacctcgaactg
gacgtaaacctggccggtggccgcgacaataccttgcagtcggtcatcgaccgctgccag
accgccatgggcagccgtctgctgacgcgctggctgaaccgtccgctgcgcgacctgaaa
gtgctgcaggcacgccagggttcgattcgctgcctgctcgacagctaccgctttgaaaaa
ctgcagccgcagctcaaggaaatcggcgacctcgaacggatccttgcccgtatcggcctg
cgcaacgcccgtccacgagacctggcgcgcctgcgcgatgccttgggcgctctacctgaa
ttgcaaaacgctatggcggagctcgaagcaccgcacctggcgcgcctggcggccatcacc
ggcacctacccggaactggccgacttgctggaaaaagccatcatcgacaacccgcccgcg
gtcatccgtgacggcggtgtgctgaaaaccggctacgacagcgaactggacgaattgctg
tccatgagcgagaacgccggccagttccttatcgatctggaagcacgggaaaaaacccgc
accggcctggccaacctcaaggtcggctacaaccgtgtgcatggctacttcatcgagctg
ccaagcaagcaggccgaacaggcacctgccgactacattcggcggcagacgctcaagggt
gccgaacgcttcatcaccccggaactgaaagtcttcgaagacaaggcgctgtcggccaag
agtcgcgcccttgcccgcgagaagatgctctacgacgcgctgctggaaaccttgatcggt
catttggcgcccctgcaagacacctccgcggccttggccgagctggatgtgctgagcaac
ctcgccgagcgcgcactgaacctggacctgaactgcccgtccttcgtcgacgagccgtgc
atgcgcatcagccagggtcgccacccggtggtcgagcaagtactgaccacaccgttcgtg
gccaacgacctggcactggacgacaacacccgcatgctggtgatcaccggcccgaacatg
ggcggtaaatccacctacatgcgccagacggcgctgattgtgctgatggcgcatatcggc
agcttcgtaccggcagccagctgcgagctgtcactggtcgaccgcattttcacccgtatc
ggctccagcgacgatctggctggcgggcgctcgaccttcatggtcgaaatgagcgaaacc
gccaacatcctgcacaacgccaccgatcgcagcctggtgctgatggacgaagtcggccgt
ggtaccagtaccttcgacggcctgtccctggcctgggctgccgccgaacgtctggcgcaa
ctgcgcgcctacacgctgtttgccactcactactttgaactcacggtgctgccggagagc
gaacctctggtggccaacgtgcacctgaacgccaccgagcacaacgagcgcatcgtgttc
ctgcaccatgtgctgccgggccctgccagccagagctacggcctggccgtggcgcaactg
gcgggcgtaccgacgccggtgatccagcgcgcgcgcgaacacctgggccggctggaaacc
gccagcctgccgcatgaaatgcctgcagtgccaaagggtgcgcaagatgttccgcaccag
agcgacctgtttgccagcctgccacacccggccatcgagaagctcgggaagctcgacctg
gacaacatgacgccgcgtcaagctatcgaaatgctctatacactgaagactctgttataa
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