Pseudomonas alkylphenolica: PSAKL28_41220
Help
Entry
PSAKL28_41220 CDS
T03238
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
palk
Pseudomonas alkylphenolica
Pathway
palk00300
Lysine biosynthesis
palk01100
Metabolic pathways
palk01120
Microbial metabolism in diverse environments
palk01230
Biosynthesis of amino acids
Module
palk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSAKL28_41220
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
palk01002
]
PSAKL28_41220
Enzymes [BR:
palk01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
PSAKL28_41220
Peptidases and inhibitors [BR:
palk01002
]
Metallo peptidases
Family M20
PSAKL28_41220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AIL63269
UniProt:
A0A077FGS6
LinkDB
All DBs
Position
4513983..4515134
Genome browser
AA seq
383 aa
AA seq
DB search
MTAPADLSPTLELACDLIRRPSVTPVDADCQKQMMQRLGDAGFMLEPMRIEDVDNFWATH
GTQDGPVLCFAGHTDVVPTGPVQAWQNDPFDALIDADGMLCGRGAADMKGSLAAMVVATE
RFVADYPNHRGKVAFLITSDEEGPAHHGTKAVIERLAARKERLDWCIVGEPSSTSLVGDV
VKNGRRGSLGAKLTVRGVQGHVAYPHLAKNPIHLAAPALAELAAEHWDEGNAFFPPTSFQ
ISNLNSGTGATNVVPGELTALFNFRFSTESTVEGLQARVAAILDKHQLDWHVDWALSGLP
FLTEPGDLLDAVSASIKAVTGRETKASTSGGTSDGRFIATLGTQVVELGPVNATIHQVNE
RILASDLDVLTEIYYQTLTRLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggccccagccgacctttcgcctaccctagaactggcctgcgacctgatccgtcgc
ccctcggtaaccccggtcgatgccgactgccagaaacagatgatgcaacgcctgggcgat
gccggtttcatgctggagccgatgcgtatcgaagacgtcgacaacttctgggccacccat
ggcacccaggacggtccggtgctgtgctttgccggtcacaccgacgtagtgcctaccggc
cccgtgcaggcctggcagaacgatccgttcgatgccctgatcgatgccgacggcatgctc
tgtggccgtggcgccgccgacatgaaaggcagcctggcggccatggttgttgccaccgag
cgcttcgtcgccgattacccgaaccatcgcggcaaggtcgccttcctgatcaccagtgac
gaagaaggcccggcccaccacggcaccaaggcggtcatcgaacgcctggccgcgcgcaaa
gagcgcctggactggtgcatcgtcggcgaaccgtcgagcaccagcctggttggcgacgtg
gtcaagaacggccgtcgcggttcgctcggcgccaagctgacagtgcgcggcgtgcagggc
catgtggcctacccgcacctggccaagaacccgatccacctggccgccccggcgctggcg
gaactggccgccgagcactgggacgaaggcaatgcctttttcccaccgaccagcttccag
atttccaacctcaactccggcactggcgctaccaacgtggtgccgggtgaactgacggcg
ctgttcaacttccgcttctccaccgagtcgacggtcgaaggcctgcaagcccgcgtcgcg
gcgatcctcgacaagcaccagctggactggcacgtcgactgggcactgtccggcctgccg
ttcctgaccgagccgggtgacctgctcgacgcggtgtcggccagcatcaaggcggtcacc
ggtcgcgaaaccaaggcctcgaccagcggcggcacctccgatggacgcttcattgccacc
ctcggcacccaggtggtcgaactgggtccggtcaacgccaccattcaccaggtcaacgag
cggatcctcgccagtgacctcgacgtgctgaccgagatctactaccagaccctgacccgg
ttgctcgcctga
DBGET
integrated database retrieval system
