KEGG   Pseudomonas alkylphenolica: PSAKL28_41830
Entry
PSAKL28_41830     CDS       T03238                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
palk  Pseudomonas alkylphenolica
Pathway
palk02024  Quorum sensing
palk03060  Protein export
palk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:palk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    PSAKL28_41830
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PSAKL28_41830
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PSAKL28_41830
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:palk02044]
    PSAKL28_41830
Enzymes [BR:palk01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     PSAKL28_41830
Secretion system [BR:palk02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   PSAKL28_41830
  Eukaryotic Sec-SRP protein
   PSAKL28_41830
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA AAA_22 APS_kinase cobW AAA_33 YqeC KTI12 nSTAND3 ParA AAA_16 6PF2K Thymidylate_kin Mg_chelatase AAA_31 SLFN-g3_helicase AAA_30 HrpJ TsaE AAA_5 AAA_14 ATP_bind_1 NACHT AAA_24 AAA_18 AAA_17
Other DBs
NCBI-ProteinID: AIL63328
UniProt: A0A077FDH1
LinkDB
Position
complement(4582971..4584347)
AA seq 458 aa
MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVNKIKERAV
GTEVSRSLTPGQAFVKIVQAELEGMMGAANEELTLNAAPPAVVLMAGLQGAGKTTTAGKL
ARFLKERKKKSVMVVSADVYRPAAIKQLETLAGDIGVTFFPSDISQKPVAIAEAAIREAK
LKFIDVVIVDTAGRLHIDAEMMTEIKDLHAAVKPIETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEKSEALEPFHPDRIASRILGMGDV
LSLIEQAEQTLDKEKADKLAKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPSIGGV
NLAQMGNAQGAAEKQFKQMEAIINSMTPAERRDPELISGSRKRRIAMGSGTQVQDIGRLI
KQHKQMQKMMKKFSAKGGMAKMMRGLGGMMPGGGMPKL
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgtttgaaaacctgaccgaccgtctgtcacagacgctgcgccatgtcactggcaaggcc
aagctgaccgaagacaacatcaaagacaccctgcgtgaagtgcgtatggcgttgctcgag
gctgacgtcgccctgccggtggtcaaggatttcgtcaacaagatcaaggagcgcgcggtc
ggcaccgaggtgtcgcgcagcctgaccccgggccaggcattcgtgaagattgtccaggcc
gagctcgaaggcatgatgggtgcggccaacgaagagctgacgctcaacgccgcgccgcca
gcggtggtcttgatggccggtttgcagggtgcgggtaagaccaccaccgccggcaagctg
gcgcgcttcctgaaagagcgcaagaagaagtcggtgatggtggtgtcggctgacgtctac
cgtccggcggcgatcaaacagctggagacactggcgggcgatatcggcgttaccttcttc
ccgtccgacatcagccagaagccagtggccatcgctgaagcggcgatccgtgaagccaag
ttgaagttcatcgacgtggtcatcgtcgacaccgccggtcgtctgcacatcgacgccgag
atgatgaccgagatcaaggacctgcacgccgcggtcaagccgatcgagaccttgttcgtg
gtcgacgccatgaccggtcaggatgctgccaacaccgccaaggcgtttggtgatgcgctg
ccgctgaccggtgtgatcctgaccaaggtcgatggcgacgcccgtggcggtgccgcgctg
tcggtgcgggccattaccggcaagccgatcaagttcatcggtatgggcgagaagagcgaa
gcgctcgagccgttccaccccgaccgtattgcttcgcgcatccttggcatgggcgacgta
ctcagcctgatcgagcaggccgagcaaaccctcgacaaggaaaaggccgacaaactggcc
aagaagctgaagaagggcaagggcttcgatctcgaagacttccgtgaccagctgcaacag
atgaagaacatgggcggcctcggcggcctcatggacaagctgccaagcatcggcggggtc
aacctggcgcagatgggcaatgcccagggcgcagccgaaaagcagttcaaacagatggaa
gcgatcatcaactccatgaccccggccgagcgccgcgaccctgagctgatcagcggttcg
cgcaagcgccggatcgccatgggctccggcacccaggtgcaggatatcggtcgcctgatc
aagcagcacaagcagatgcagaagatgatgaagaagttttctgccaaaggtggcatggcg
aaaatgatgcgcggcctgggcggtatgatgcccggcggcggcatgcccaagctgtaa

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