KEGG   Pseudomonas alkylphenolica: PSAKL28_42210
Entry
PSAKL28_42210     CDS       T03238                                 
Name
(GenBank) Rhs element Vgr protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
palk  Pseudomonas alkylphenolica
Pathway
palk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:palk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PSAKL28_42210
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:palk02044]
    PSAKL28_42210
Secretion system [BR:palk02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PSAKL28_42210
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 DUF2345 DUF6296 Sarcoglycan_1 DUF2917
Other DBs
NCBI-ProteinID: AIL63365
UniProt: A0A077FFY6
LinkDB
Position
complement(4624073..4626088)
AA seq 671 aa
MFAPTNSVQFELLIPMVRNDFKVLAFDGTEAISALYAIHIELVSEYPDLDLESLLSQPAF
LRFGLNGEGLHGRIEDVRVEEPGTRLTRYRLTLVPALYYLQFSHNQRIFQHLTVPQIIAQ
VLQGHGIQADAYSFHVSPRPVREYCTQYGEDDLSFIMRLCSEEGIAWHHQHSPDGHRLVF
TDDQVFFPKLGATPYQQGAGLVADHPVISQFSQRFSTRTTTVTRRDYDLKRPSRLVESHS
TAEFKPALEDYHYPALIETEERGKQLARRALERHRSDYQLAEGKSDQPSLRSGHFFDLCE
HPRKASNDLWLLLSVSHKGKQPQVLEESVANDDQPEDGFSQGYRNSFSAIPWDVFYRPPL
VTRKSVLVSQTARVTGPEGEEIFCDEHGRVKVEFHWDRAELNSDKSSCWLRVSSSWAGEG
FGAVTIPRIGMEVVVTYLEGNPDRPLITGCVPNTRTAVPYPLPANKTKTVLRSHSSPASG
GYNELSVEDRAGQEKIYLRAQRDLEQKIENDSRLEVGNERRETIKGNSIAVLEAEDQRTV
TADRKVELKANDYLQIASSSHTRVGQTLVIEAGQQVHLKAGREVVLDAGGSISLKGGGQH
IVVGPGGIFSSSEIQIGGAPIAGTAAAPELPGMLEGLSTPPPLALVSQSKALMRPEPWCE
VCEQAAEETNQ
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgttcgcaccgaccaatagcgtgcagttcgaattacttatccccatggttcgcaatgat
ttcaaggtcctggcgtttgacggcacggaagccatcagcgcgttgtacgcgatccacatt
gaactggtcagcgagtaccccgacctcgatcttgagagtctgctcagtcagccggcgttt
ctgcgcttcggattgaacggtgaagggctgcatggccgcatcgaagacgttcgggtggag
gagcccggtacacgcctgacccgctatcggctgaccctggtgccagcgctgtactacttg
cagttcagccacaaccagcggattttccagcaccttacggtgccgcagattatcgctcag
gtgctccagggccatggcatccaggccgatgcctatagctttcatgtcagcccccggccg
gtgcgcgaatactgcacgcagtatggggaggatgacctcagcttcatcatgaggctgtgc
agtgaagaaggcattgcctggcatcaccagcacagcccggacggtcatcggctggtgttc
accgacgatcaggtcttttttcccaaactgggggcaaccccctatcagcaaggcgccggt
ctggtggccgatcacccggtcatcagccagttctcccagcgcttcagcacccggaccact
accgtcacccgccgagactacgacctcaagcgcccaagccggttagtggagagccactcc
actgccgagttcaagccggcgcttgaggattaccactaccccgcgctgatcgaaaccgaa
gaacgcggcaagcagcttgcccgtcgggccctggaacggcaccgtagtgactaccagttg
gccgaaggcaaaagcgatcagccgagcctgcgcagcggtcatttcttcgacctgtgcgaa
cacccgcgcaaagcgagcaacgacttgtggctattgctcagcgtaagccacaaaggcaaa
cagccgcaggtgcttgaggaatcagttgccaacgacgaccagcccgaagacggcttcagc
cagggctaccgcaacagcttcagcgctatcccctgggacgtgttctaccggccaccgctg
gtcacccgaaaatcggtgctggtcagccagaccgctcgggtcaccggacctgagggcgaa
gaaatcttctgcgatgagcatggccgggtcaaagtcgagttccattgggaccgtgccgag
ctgaacagtgacaagagcagttgctggctgcgggtttcatccagctgggccggggagggc
ttcggcgcggtgaccatcccgcgcatcggcatggaagtggtggtgacctaccttgagggc
aatcctgaccggccgttgatcaccggctgtgtgccgaacacgcgcacggcggtgccgtac
ccgttgcccgcaaacaaaaccaaaaccgtgttgcgcagccacagttcgcccgccagtggc
ggctacaacgaactgtcggttgaagaccgggccgggcaggaaaaaatctacctgcgtgcc
cagcgtgacctggagcaaaaaatcgaaaacgacagccggctggaagtcggcaatgaacgc
cgggaaaccatcaagggcaacagcattgcggtgctggaggcagaagaccagcgcaccgtg
acggcggatcgcaaggtcgagctcaaggccaacgattacctgcaaatcgccagcagcagc
cacacccgggtcgggcaaacgctggtgatcgaggccggtcagcaagtgcacctcaaggcg
ggccgcgaagtcgtgctggacgctgggggcagcatcagcttgaaaggcggaggtcagcat
atcgtcgtaggcccaggcggcatcttcagcagtagcgagattcaaatcggtggtgcgccc
attgccggaaccgcagcggcgccggagttgcccggcatgctcgaaggattatcgacgcca
ccgccactcgcgcttgtgtcgcagagcaaggcactgatgcggcctgagccatggtgtgaa
gtgtgtgaacaggctgcggaggaaactaaccagtga

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