Pseudomonas alkylphenolica: PSAKL28_42270
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Entry
PSAKL28_42270 CDS
T03238
Name
(GenBank) RpiR family transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
palk
Pseudomonas alkylphenolica
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palk03000
]
PSAKL28_42270
Transcription factors [BR:
palk03000
]
Prokaryotic type
Helix-turn-helix
Other families
PSAKL28_42270
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
CHRD
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AIL63371
UniProt:
A0A077FJA0
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Position
4632343..4633212
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AA seq
289 aa
AA seq
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MDRVRNLLEQIQGRLEELNKAERKVAEVILLNPQQATRFSIAALAQAAKVSEPTVNRFCR
SFGVSGYPELKLQLAQSLASGAAYVSRAVEADDDPASYTQKIFGSAIASLDSACQQLDPQ
LISRAVDMLIQARQIHFFGLGASAPVALDAQHKFFRFNLAVSAHADVLMQRMLASVAHTG
ELFVIISYTGRTRELVEVARLARENGASVLGLTAADSPLAKASSLSLNIPLPEDTDIYMP
MTSRIIQLTVLDVLATGMTLRRGVDFQPHLRKIKESLNASRYPIDDELN
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgtgcgaaacctcctggagcagatccagggccgcctcgaagagctgaacaag
gctgagcgcaaagtcgccgaagtcatcctgctcaaccctcagcaagccacccgcttcagc
attgccgccctggcccaggcggccaaggtcagcgaaccgacggtgaaccgcttctgccgt
tcgttcggcgtcagtggctaccccgagctcaaactgcagctggcgcagagcctggccagc
ggcgccgcttacgtcagccgggcggttgaagccgatgatgatccggcgtcctacacccag
aagatcttcggcagcgccatcgcctcgctggacagtgcctgccagcaactcgacccgcaa
ctgatcagccgcgccgtcgacatgctgatccaggcccggcagatccacttcttcggcctc
ggcgcctcggcaccggtggcgctggatgcccagcacaagttcttccgcttcaacctggcc
gtctcggcccacgccgatgtcctgatgcagcgcatgctggcctcggtcgcccacaccggc
gagctgttcgtcatcatctcctacaccggacgtacccgcgagctggtcgaagtcgcgcgc
ctggcccgggaaaacggcgcctcggtactcggcctgaccgctgccgattcgcccctggcc
aaggccagcagcctgagcttgaacataccgctgccagaagacaccgatatttacatgccg
atgacctcgcggatcattcagctgacggtgctcgacgtgttggccaccggcatgaccttg
cgccgcggcgtggacttccagccacacctgcgcaagatcaaggagagcctcaacgccagc
cgctacccgatcgacgacgagctcaactaa
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