Pseudomonas alkylphenolica: PSAKL28_45720
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Entry
PSAKL28_45720 CDS
T03238
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
palk
Pseudomonas alkylphenolica
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palk03400
]
PSAKL28_45720
Enzymes [BR:
palk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PSAKL28_45720
DNA repair and recombination proteins [BR:
palk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PSAKL28_45720
Prokaryotic type
PSAKL28_45720
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AIL63712
UniProt:
A0A077FDY3
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All DBs
Position
4979486..4980931
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AA seq
481 aa
AA seq
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MQLIWLRSDLRVDDNTALSAACEQGPTLAVWLVSTQQWRSHDDAPCKVDFWLRNLAALSE
RLATLNIPLLVREADTWDQAPDVLLQLCREHQVQALHLNEEYGINESRRDQAVSEMLSQA
GIAVHRHLDQLLFKPGSILTRSGGYFQVFSQFRKVCYERLHLGLPSLRPPLMPQAPLAVA
NDALPTQVLGFAVPPASLSDLWPAGETEAHDRLQRFIDEAVDDYQLQRDFPAVAGTSQLS
PYLAAGVISPRQCLLRALAHNHGEFDSGNTGLVTWINELIWREFYKHILNGYPRVSRHRA
FRQETEALPWRHAPDELKAWQEGRTGIPIIDAAMRQLLATGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPISQSRRFDSQGWFIK
RWLPELAASDEKNIHNPMPLAQLFATNDYPQPIVDLGSSRQRALNAFKNLSTRQVEELPF
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgatctggctgcgcagcgacctgcgcgtagacgacaacaccgcattgtccgcc
gcatgcgaacaggggccgaccctggctgtctggctggtcagcacacaacagtggcgcagc
catgatgacgccccctgcaaagtcgatttctggttgcgtaacctggcagcattgagcgag
cgcctggccacgttgaacatcccgctgctggtgcgcgaagccgacacctgggaccaggcc
cctgatgtgctgctgcagctctgtcgcgagcaccaggttcaggcactgcacctgaacgaa
gagtacggtatcaacgaaagccgtcgcgatcaggctgtcagcgagatgctgtcgcaggcg
ggcattgcggtgcatcgccatctggatcaattgttgttcaaacccggcagcatcctcacc
cgcagcggtggctacttccaggtcttcagccagtttcgcaaagtctgttacgaacgcttg
cacctaggcctgcccagtctacggccgccgctaatgccccaggcaccgctggcggtcgcc
aacgatgcgctccccactcaggtgctgggtttcgccgtgccacctgccagcctgagcgat
ctctggcctgccggtgaaaccgaagcccatgaccgcctgcagcgctttatcgatgaagcc
gttgatgactaccagttgcaacgggactttcccgccgttgccggcaccagccaactctcg
ccttatctcgcagcgggcgtcatctcccctcgtcagtgcctgcttcgtgccttggcgcac
aaccacggcgagtttgacagtggcaacaccgggctggtgacctggatcaacgagctgatc
tggcgtgagttctacaagcacatccttaacggctacccgcgggtgtcgcgccaccgcgcc
ttccgccaggagaccgaggcactcccctggcgccacgcacccgatgagttgaaagcctgg
caggaaggccgtaccggcattccgatcatcgacgcggccatgcgtcaactgcttgccacc
ggctggatgcacaatcgactgcggatggtcgtggcgatgttcctgaccaagaacctgttg
atcgactggcgcgaaggcgagcgcttcttcatgcgccacctgattgatggcgacctggcc
gccaacaatggcggctggcagtggagcgcctccaccggaaccgatgcggtgccttacttc
cggatcttcaatccgatcagccaatcccggcgtttcgacagtcaaggctggtttatcaag
cgctggttgccagagctggcagcctccgatgaaaaaaacattcataacccaatgccactt
gcacagttatttgctacaaatgattacccacaacccattgtggacctcggtagcagtcgc
caacgtgccttgaatgctttcaagaatttgtccacgcggcaggttgaggaattacctttt
gaataa
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