Pseudomonas alkylphenolica: PSAKL28_46270
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Entry
PSAKL28_46270 CDS
T03238
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
palk
Pseudomonas alkylphenolica
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palk03400
]
PSAKL28_46270
DNA repair and recombination proteins [BR:
palk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PSAKL28_46270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
DnaB_C
GvpD_P-loop
AAA_22
RecA
AAA
SLFN-g3_helicase
Rad51
DUF7125
AAA_24
nSTAND3
AAA_14
NTPase_1
AAA_5
MCM
PAXNEB
AAA_29
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AIL63767
UniProt:
A0A077FE36
LinkDB
All DBs
Position
complement(5038383..5039750)
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AA seq
455 aa
AA seq
DB search
MAKAKRMYGCTECGATFPKWAGQCGECGAWNTLVETVLESGAAAAPSGRTGWAGQQAQIK
TLAEVSVEEIPRFSTASAELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCAIATRMP
ALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIEAIIATARVEKPKVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHLSNPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAIMSSLRNRPLDNSLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKEAPPGLQVIAVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaagcgcatgtacggctgcactgagtgcggcgcgacctttccgaaatgg
gccggacagtgcggtgagtgcggggcctggaacaccctggtcgagaccgtgctggaaagc
ggcgcagcagcggcgcccagtggccgcaccggctgggccgggcagcaggcgcagatcaag
accctggccgaggtcagcgtcgaagagatcccgcgtttcagcaccgccagcgccgagctg
gaccgggtattgggcggcggcttggttgacggttcagtggtcctgatcggtggcgacccg
ggtatcggcaagtcgaccattctcctgcaaaccctgtgcgccatcgctacgcgcatgccc
gcactgtatgtcaccggcgaagaatcccagcaacaggtggcgatgcgtgcccggcgcctg
gggttgccccaggatcagttgcgggtaatgaccgaaacctgcatcgaggcgatcatcgcc
actgcccgggtggaaaagcccaaggtcatggtgatcgattcgatccagaccattttcacc
gagcagttgcagtcggcgcctggtggtgtctcccaggtgcgtgagagcgccgcgttgctg
gtgcgttacgccaagcagagcggcacggcgatcttcctcgtcggtcatgtcaccaaggaa
ggtgcgctggcaggcccgcgggtgctggagcacatggtcgataccgtgctgtatttcgaa
ggcgagtccgacggccgcctgcgtttgctgcgggcggtgaagaaccgttttggtgcggtc
aatgaactgggcgtgttcggcatgaccgatcgcggcctgaaggaggtctccaacccttcg
gcaatcttcctcacccgcgcgcaggaagaggttcccggcagtgtggtcatggccacctgg
gaaggcacccggccgatgctggtggaagtccaggcgctggttgatgacagtcacctgtcg
aacccgcgccgggtcactctgggcctggaccagaaccgcctggccatgctcctggcggtg
ctgcatcgccatggcggcattccgacccatgaccaggatgtcttcctcaacgtggtcggc
ggggtcaaggtgctggagaccgcgtccgacctggcgttgatggcggcgatcatgtccagc
ttgcgcaaccgtccgctggataacagcctgctggtattcggcgaagtcggtctgtcgggt
gaggtgcgtccggtgcccagcggccaggagcgcctgaaagaagcggccaagcatggcttc
aaacgcgccatcgtgcccaagggcaacgcacccaaggaagcgccaccaggtttgcaggtg
attgcggtcactcgtctggagcaagcgctggatgcgttgttcgagtaa
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