Pseudomonas alkylphenolica: PSAKL28_46660
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Entry
PSAKL28_46660 CDS
T03238
Name
(GenBank) diguanylate cyclase (GGDEF) domain-containing protein
KO
K21021
diguanylate cyclase [EC:
2.7.7.65
]
Organism
palk
Pseudomonas alkylphenolica
Pathway
palk02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSAKL28_46660
Enzymes [BR:
palk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
PSAKL28_46660
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE8
HAMP
RELT
Motif
Other DBs
NCBI-ProteinID:
AIL63806
UniProt:
A0A077FKL4
LinkDB
All DBs
Position
complement(5078885..5080156)
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AA seq
423 aa
AA seq
DB search
MIGFGWGRQRPTLRAVLGRRHLSVALLAVGLAGVALTVLGVLALRVYANHNLHLIARSIN
YTVEAAVVFNDSSAANEALALIASTEEVADAKVFDDSNQLLARWQRSDDSLLARVEQQVA
RSLLEEPIILPVLHQGQQVGRIELVGQGGSLVRFLLSGLAGILLCTVLSALGALYLSRRM
FGDIVGPLRSLATVAHAARRERSFDRRVPEAQIAELNELGNDFNALLDELESWQSHLQSE
NESLAHQASHDSLTGLPNRAFFEGRLSRTLRNASKYREHMALLFLDSDNFKDINDSHGHA
AGDEVLVSVATRVRAQLRENDLVARLGGDEFAVLLTPLHSREDAQRIAEKIIASMRLPVR
LGEGQSIVTSLSVGIAFFPDDGQTPSDLLNAADAAMYQAKRNTRGQWQAAETESSANHVK
NRS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgatcggctttggctgggggcgtcagcgtccgaccctgcgcgcagtgctggggcgtcgc
cacttgagcgtggccttgctggctgtgggcctggccggtgttgccctgacggtgcttggc
gtgctggcgctgcgcgtgtatgccaatcacaacctgcacctgatcgcccgctcgatcaat
tacaccgttgaagccgccgtggtcttcaacgacagcagcgcggccaatgaggccctggca
ctgatcgcctccactgaagaggtggctgatgccaaagtgttcgacgatagcaaccagttg
ctcgcccgttggcagcgcagtgatgacagcttgctggcacgggtggagcaacaagtggcc
cgtagtctgctggaagagcccatcattctcccggtcctgcatcagggccagcaggttggt
cgtattgagctggtgggccagggtggcagcctggtgcgcttcctgctcagcggcctggcc
ggcatcctcctctgtaccgtactcagcgcccttggggcgttgtacctgtcgcggcgtatg
ttcggcgatatcgttggccccttgcgcagcctggccacggtggctcacgccgcgcggcgt
gaacgcagcttcgaccgtcgtgtgcctgaggcgcagattgccgagctcaatgagctgggc
aatgacttcaatgccttgctcgacgaactggaaagctggcagagccatctgcagagcgag
aacgaaagcctcgcccaccaggccagccatgacagcttgaccggcttgcccaatcgggcc
tttttcgaaggccggctcagccgcacgctgcgtaatgccagcaagtaccgggagcacatg
gcgctactgtttctcgacagtgacaacttcaaggacatcaacgacagccatggccatgcg
gccggcgacgaagtactggtcagcgtcgccacccgggtacgcgcgcagctacgcgagaat
gatctggtagcgcgcctgggcggtgacgaatttgccgtgctgctgacacctcttcacagc
cgcgaggatgcccagcgcattgccgagaaaatcattgccagcatgcgtctgcctgttcgt
ctgggagaagggcagagcatcgtcacatccctgagtgtcggcattgctttcttcccggat
gacggtcagacgccgtcggatttgttgaatgccgccgacgcggcgatgtatcaggccaag
cgcaacacccgtggccagtggcaagcggcagagacggagagctctgccaatcatgtaaaa
aacaggagctga
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