KEGG   Pseudomonas alkylphenolica: PSAKL28_48140
Entry
PSAKL28_48140     CDS       T03238                                 
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
palk  Pseudomonas alkylphenolica
Brite
KEGG Orthology (KO) [BR:palk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:palk03032]
    PSAKL28_48140
   03036 Chromosome and associated proteins [BR:palk03036]
    PSAKL28_48140
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:palk02048]
    PSAKL28_48140
Enzymes [BR:palk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     PSAKL28_48140
DNA replication proteins [BR:palk03032]
 Prokaryotic type
  DNA Topoisomerases
   PSAKL28_48140
Chromosome and associated proteins [BR:palk03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    PSAKL28_48140
Prokaryotic defense system [BR:palk02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    PSAKL28_48140
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_2 HATPase_c_3 TOPRIM_C
Other DBs
NCBI-ProteinID: AIL63954
UniProt: A0A077FIM3
LinkDB
Position
complement(5255894..5257798)
AA seq 634 aa
MAIPSASAYNADAIEVLSGLDPVRKRPGMYTDTSRPNHLAQEVIDNSVDEALAGHAKSVQ
VILHADHSLEVSDDGRGMPVDIHPEEGVSGVELILTKLHAGGKFSNKNYQFSGGLHGVGI
SVVNALSSQVRVKVKRDGNEYQMTFADGYKATELEVVGTVGKRNTGTSVYFAPDPKYFDS
PKFSISRLKHVLKAKAVLCPGLLVSFEDKASGEKVEWHYEDGLRSYLVDSVSEFLRLPDE
PFCGSLAGNKEAADWALLWLPEGGDSIQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCE
FRNLLPRGVKLAPEDVWERISFVLSMKMQEPQFSGQTKERLSSREAAAFVSGVVKDAFSL
WLNANPELGMQLAELAINNAGRRLKASKKVERKRVTQGPALPGKLADCAGQDPMRAELFL
VEGDSAGGSAKQARDKEFQAILPLRGKILNTWEVDGGEVLASQEVHNIAVAIGVDPGAAD
MSQLRYGKICILADADSDGLHIATLLCALFVQHFRPLVEAGHVYVAMPPLYRIDLGKEIY
YALDEAERDGILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDPNTRRLVQLTLDDL
DGTREIMDMLLAKKRAGDRKNWLESKGNLAEVLA
NT seq 1905 nt   +upstreamnt  +downstreamnt
atggccattcccagcgctagtgcctataacgcagacgccatcgaagtcctctcgggcctt
gacccggtgcgcaaacgcccgggcatgtacaccgacaccagccggccgaaccacctggcc
caggaagtcatcgacaacagtgtcgacgaagccctggccgggcacgccaagtcggtgcag
gtgatcctgcacgccgaccattcgctggaagtgtccgatgacggtcgcggcatgcccgtg
gatatccacccggaagagggtgtttccggggtcgaactgatccttaccaagctgcacgcc
ggcggcaagttctccaacaagaactaccagttctccggtggtctgcacggcgtgggtatt
tccgtggtcaacgccttgtccagtcaggtgcgggtcaaggtcaagcgcgatggcaacgag
taccagatgaccttcgccgacggctacaaggccaccgagctggaagtcgtcggtacagtt
ggcaagcgcaataccggcaccagcgtgtatttcgcgccggacccgaagtatttcgattca
ccgaagttttccatcagccgcctcaagcacgtgctcaaggccaaggcggtcttgtgcccg
gggctgctggtcagcttcgaagacaaggccagcggcgaaaaagtcgaatggcactatgaa
gacggtctgcgttcctacctggtcgactcggtcagcgagttcctgcgcctgcccgatgag
ccgttctgcggcagcctggcggggaacaaggaagctgccgactgggccctgttgtggttg
cccgagggcggcgacagcatccaggaaagctacgtcaacctgattcctaccgctcagggc
ggcacgcacgtcaacggcctgcgccaaggcttgctcgatgccatgcgcgagttctgcgag
ttccgcaatctgttgcctcgtggtgtcaagctggcacccgaagatgtctgggaacgcatc
agcttcgtcctgtcgatgaaaatgcaggagccgcaattctccgggcagaccaaggaacgc
ctgtcgtcccgtgaggccgctgcgttcgtctccggggtggtcaaggacgccttcagcctg
tggctcaatgcgaaccccgagctgggcatgcagcttgccgagctggccatcaacaatgcc
ggacgtcgactcaaagccagcaagaaggtcgaacgcaagcgcgttacccaggggccggca
ttgccgggcaagctggctgactgcgccgggcaggacccgatgcgagccgagctgttcctg
gtcgagggtgactcggcaggcggttcggccaagcaggcgcgcgacaaggagtttcaggcg
atcctgccgctgcgcggcaagatcctcaacacctgggaagtcgacggtggtgaagtcctg
gccagccaggaggtgcacaacatcgccgtggccatcggtgtcgatcccggtgctgccgac
atgagccagctgcgctacggcaagatctgcatcctcgccgacgccgactccgacggtctg
cacattgccaccttgctttgcgctctgttcgtccagcacttccgtccgctggtcgaggcc
ggtcacgtctacgtggccatgccgccgctgtaccgcatcgacctgggcaaggaaatctac
tacgccctcgatgaagccgagcgtgatggcatcctcgatcgcctggtcgccgagaagaag
cgcggcaagccgcaggtcacgcgattcaaaggccttggtgaaatgaacccgccgcagctg
cgtgaaaccaccatggatccgaacacccgccgtctggtccagttgaccctggacgatctg
gacggcacccgcgaaatcatggacatgctgctggccaagaagcgtgccggagaccgcaag
aactggctggagtccaaaggcaacctggccgaggtcctggcttga

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