Pseudomonas alkylphenolica: PSAKL28_51640
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Entry
PSAKL28_51640 CDS
T03238
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
palk
Pseudomonas alkylphenolica
Pathway
palk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PSAKL28_51640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palk03021
]
PSAKL28_51640
03400 DNA repair and recombination proteins [BR:
palk03400
]
PSAKL28_51640
Enzymes [BR:
palk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PSAKL28_51640
Transcription machinery [BR:
palk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PSAKL28_51640
DNA repair and recombination proteins [BR:
palk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PSAKL28_51640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AIL64304
UniProt:
A0A077FJM5
LinkDB
All DBs
Position
5651974..5652240
Genome browser
AA seq
88 aa
AA seq
DB search
MARVTVEDCLEHVDNRFELVMLSTKRARQLATGGKEPKVAWENDKPTVVALREIAEGICT
PEFIAAESIVEVEPAFAFGSEEEANEAV
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtaaccgttgaagactgcctagaacacgtggataaccgttttgagctggtc
atgctctctaccaagcgtgcccgtcagctggccaccggcggcaaagagccgaaagtggca
tgggaaaacgacaagcctaccgtcgttgccctgcgtgaaatcgctgaaggcatctgcacc
cctgaattcatcgctgccgaatccattgtcgaagtcgagcctgcctttgcatttggtagc
gaggaagaggccaacgaggcggtctaa
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integrated database retrieval system
