Ectopseudomonas alcaliphila: UYA_00020
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Entry
UYA_00020 CDS
T06680
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pall
Ectopseudomonas alcaliphila
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pall03032
]
UYA_00020
03400 DNA repair and recombination proteins [BR:
pall03400
]
UYA_00020
Enzymes [BR:
pall01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
UYA_00020
DNA replication proteins [BR:
pall03032
]
Prokaryotic type
DNA Topoisomerases
UYA_00020
DNA repair and recombination proteins [BR:
pall03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UYA_00020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
APU28172
LinkDB
All DBs
Position
3814..6234
Genome browser
AA seq
806 aa
AA seq
DB search
MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGYCSE
ITITIHPDESISVRDNGRGIPVDMHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSKELVLTIRRSGKIWEQTYVHGVPQAPLAAVGDTDGTGTQIHFKPSEQTFAN
IHFSWDILAKRLRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTVVNQV
FHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRHLNNYIE
AEGLAKKFKVSTTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFS
DFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALS
ELYIVEGDSAGGSAKQGRNRKTQAILPLKGKILNVERARFDRMISSQEVGTLITALGCGI
GRDEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKVK
KGKQEQYIKDDEAMDEYMTQSALEDASLHVNENAPGLSGGALEKLVGEYRGVMKTLDRLS
RVYPKDITEHFVYLPRIPVEQLADQAFMQNWLEGFAARLKTTEKSGQSYSASLREDRERH
LWLPEVEVRSHGLSSYTTFNRDFFASNDYKTVTTLGEQLNNLLEEGAYVQRGERKKPVST
FKEALDWLMTESTKRHSIQRYKGLGEMNPDQLWETTMDPEVRRMLKVTIEDAIAADQIFN
TLMGDAVEPRRDFIESNALAVSNLDF
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaaccaaacgtacgactcctccagcatcaaggtgctgaaaggactggacgcc
gtacgcaaacgtcccgggatgtacatcggtgacactgacgatggtagtggtctgcaccac
atggtgttcgaggtggtcgacaactcgatcgacgaagcgctggcaggctactgcagtgaa
atcaccatcaccatccacccggatgaatcgatcagtgtgcgcgataacggccgtggtatc
ccggtcgacatgcacaaggaagaaggcgtctcggcggccgaggtcatcatgaccgtgctg
cacgccggcggtaagttcgatgacaacagctacaaggtatccggcggcctgcacggtgtg
ggtgtgtcggtggtgaacgccctctccaaggagctggtgctgaccatccgccgtagcggc
aagatctgggaacagacctacgtgcatggtgtaccgcaagcgcctctggccgctgtcggt
gataccgacggtaccggtacgcagatccacttcaagccgtccgagcagaccttcgccaac
atccacttcagctgggacatcctggccaagcgtctgcgcgaactgtccttcctcaactcc
ggcgtgggcatcctgctgcgcgacgagcgcaccggcaaggaagagctgttcaagtatgaa
ggtggtctgaaggctttcgttgagtacctgaacaccaacaagaccgtggtcaaccaggtg
ttccacttcaacgttcagcgtgaagaagacggcgttggtgtcgaagttgccctgcagtgg
aacgacagcttcaacgagaacctgctctgcttcaccaacaacattccgcagcgtgacggt
ggtactcacctggcgggtttccgctctgccctcacccgccacctgaacaactacatcgag
gccgaaggcctggccaagaagttcaaggtttccaccaccggtgacgatgcccgcgaaggt
ctgactgcgattatctcggtcaaggtgccggacccgaaattcagctcgcagaccaaggac
aaactggtatcgagcgaggtgaaaactgcggtcgaacaggagatgggcaagtacttctcc
gacttcctgctggagaaccccaacgaagccaaggccgtggtcggcaagatgatcgatgcc
gcgcgtgcccgcgaagcagcccgtaaagcccgtgaaatgactcgccgcaaaggtgcactg
gacatcgccggcctgcccggcaaactggccgactgccaggaaaaagacccggcgctgtcc
gaactctacatcgtggagggtgactccgcgggcggttctgccaagcagggccgtaaccgc
aagacccaggcgatcctgccgctcaagggcaagatcctcaacgtcgaacgcgcgcgcttc
gaccgcatgatttcctcgcaggaagtcggcacgctgatcactgcgctcggctgcggcatt
ggccgtgatgaatacaacatcgacaagctgcgctaccacaacatcatcatcatgaccgat
gctgacgtcgacggttcgcacatccgtaccctgctgctgaccttcttcttccgccagttg
ccggagctggtagagcgcggctacatctacatcgcccagccgccgctgtacaaggtgaag
aaaggcaagcaggagcagtacatcaaggacgacgaggccatggatgaatacatgacccag
tcggccctggaagacgccagcctgcacgtcaacgagaatgccccaggcctgtccggcggc
gcgctggaaaagctcgtgggcgaataccgtggcgtcatgaagaccctggatcgactgtcg
cgtgtctatcccaaggacatcaccgagcacttcgtctatctgccgcgcattccggtggag
cagctcgctgatcaggccttcatgcagaactggctggaaggcttcgctgcacgtctgaag
actaccgagaagtctggccagagctacagtgctagtctgcgtgaagaccgcgagcgtcac
ctgtggctgccggaagtggaagtcagatctcatggtctttccagctacaccaccttcaac
cgcgacttcttcgccagcaatgactacaagaccgtcactaccctgggcgaacagctgaac
aacttgctggaagaaggcgcctacgtgcagcgtggcgagcgcaagaaaccggtcagcacc
ttcaaggaagcgctggactggctgatgaccgaaagcaccaagcgtcacagcatccagcga
tacaaaggtctcggtgagatgaacccggatcagttgtgggaaaccaccatggacccggaa
gtgcgccgcatgctcaaggtgaccatcgaagacgccatcgccgccgaccagatcttcaac
accctgatgggcgacgccgtggagccgcgccgcgacttcatcgagtccaacgccctggcg
gtgtcgaatctggacttctga
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