Pseudomonas alcaliphila: UYA_00420
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Entry
UYA_00420 CDS
T06680
Name
(GenBank) type VI secretion protein
KO
K11895
type VI secretion system protein ImpH
Organism
pall
Pseudomonas alcaliphila
Pathway
pall02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
UYA_00420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pall02044
]
UYA_00420
Secretion system [BR:
pall02044
]
Type VI secretion system
Imp/Vas secretion system core components
UYA_00420
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
T6SS_TssG
HalOD2
Motif
Other DBs
NCBI-ProteinID:
APU28247
UniProt:
A0A1L7FTV5
LinkDB
All DBs
Position
87471..88478
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AA seq
335 aa
AA seq
DB search
MDATYGAAAPALSRLSKGIREYSLFQAVQLVLERLKVAHPQLDDERLYEYLEFQANPSLG
FPGSDIDRVQFFEEHGELRARMRVNLVGLFGGGSPLPAFYSEQALGDSEDGNPTRDFLDL
FNNRLQRLLLPIWQKYRYRASFQSGAMDAFSAHLFALIGLGSEQIRQAQELNWKRLLPYL
GLLSLRAHSAALIESVLRYYFKHAELFIEQCLERQVVVLEEQRNRLGRANSLLGEDTVLG
ERVRDRGGKFRIHVRQLGWTRFHEFLPIGTGYQPLCALVRFTLRDPLDYDIRLELRQDEI
RDLRIGEGNPCLLGWTTWLGRENADGLVTLGSKIH
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggacgccacgtatggggcagcagcccctgctctaagtcgattgagcaaaggcatccgc
gagtacagcctgttccaggccgtacagctggtgctagagcgcctcaaggttgcccacccg
caactggatgacgagcgcctctacgagtacctggagttccaggccaacccgagcctgggt
ttccccggcagcgatatcgatcgcgtgcagttcttcgaggagcacggcgagttgcgcgcg
cgcatgcgcgtcaacctggtcggcctgttcggcggcggttcgccattaccggccttctac
agcgagcaggctctgggcgacagcgaggacggcaacccgacccgcgacttcctcgatctg
ttcaacaaccgtctgcagcgcctgttgctgccgatctggcagaagtaccgctaccgcgcc
agcttccagagcggggcgatggacgccttctctgcgcacctgttcgccctgatcggcctg
ggcagcgagcagatccggcaggcccaggagctgaactggaagcgcctgctgccctacctc
ggtctgctcagcctgcgcgcccattcggcggcgctgatcgagtcggtgctgcgttactac
ttcaagcacgccgaactgttcatcgagcagtgtctggagcgccaggtggtggtgctggaa
gagcagcgcaaccgcctcggccgcgccaacagcctgctcggcgaagacaccgtgctcggc
gagcgcgtacgcgaccgcggcggcaagttccgcatccacgtgcgccagctgggctggacg
cgctttcacgagttcctgccgatcggcacgggttaccagccgctctgtgcgctggtgcgc
ttcaccctgcgcgatccgctggactacgacatccgcctggagctgcgtcaggacgaaatc
cgcgacctgcgcatcggcgaaggcaacccctgcctgctgggctggaccacctggctcggc
cgtgagaacgccgatggccttgtcactctgggcagcaagattcattaa
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