KEGG   Pseudomonas alcaliphila: UYA_00430
Entry
UYA_00430         CDS       T06680                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
pall  Pseudomonas alcaliphila
Brite
KEGG Orthology (KO) [BR:pall00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pall03000]
    UYA_00430
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pall02044]
    UYA_00430
Transcription factors [BR:pall03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    UYA_00430
Secretion system [BR:pall02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   UYA_00430
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 GAF_2 AAA_5 AAA_2 HTH_30 GAF AAA_16 GAF_3 AAA HTH_50 AAA_7
Other DBs
NCBI-ProteinID: APU28249
UniProt: A0A1L7FTV9
LinkDB
Position
91101..92630
AA seq 509 aa
MFAEVPQPLRYAEALLGRYAELAGAASSERLLANLVRAAAELADCALGQLYLLDHTNTRL
TLSAEWLDGLLQPRESASLPSDYDGEQLLQYCLCQNQVLCIDELDSGLHNIACLPEGSRA
WRSLLCLPLHDGVGRTRGLLLVASHERRILQGFAASFAQLGSFALAQLQLLQRLRAPAVD
GAANAASVSSVPGTPCASGYGLLGQSQAMRRVYQLIGKVLHSPVSVLLTGETGTGKELVA
RAIHDCGARRSKAFIVQNCAALPENLLESELFGYRKGAFTGADRDKPGLFDAADGGTLFL
DEIGDMPLTLQAKLLRVLQEGEVRPLGCSETHKVDVRIVAATHQELRKRVEEGRFREDLF
YRLSHFPIELPALRERDEDILLLARHFASTASGLLQRDACRWSDAALEHLAGYAFPGNVR
ELKGVVERAVLLCEGGELLPEHFNLEQTQSEGSEPLSLRERMDRLERNLLLDCLRKNRGN
QTNAANELGLPRRTLLYRMQRLKISPSEV
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgttcgccgaagttccgcaaccgctgcgctacgccgaagccctgcttggccgctatgcc
gaattggccggcgctgccagcagtgagcgcctgctcgccaacctggtgcgtgccgccgcc
gaactggccgactgtgcgctgggccagctgtatctgctggaccataccaacacccgcctg
accctctcggccgagtggctcgacggcctgctgcaaccgcgcgagtcagccagcctgccg
agtgactacgacggcgaacagctgctgcagtactgcctgtgccagaaccaggtgctgtgt
atcgacgagctggacagcggcctgcacaacatcgcctgtctgccggaaggcagccgtgcc
tggcgcagcttgctgtgcctgccgctgcatgacggcgttgggcgtactcgtggtctgctg
ctggtagccagccatgagcggcgaatcctgcagggctttgccgcctctttcgcccagctt
ggcagtttcgccttggctcagctgcagctgttgcagcgtctacgtgcaccagctgtcgac
ggtgccgccaatgctgcaagcgtctcgtctgttccaggcacgccctgtgccagcggctac
ggtttgctcggtcagagccaggccatgcgccgcgtctaccaactgattggcaaggtgctg
cacagcccggtcagcgtgttgcttactggcgagacgggtaccggcaaggaactggttgcc
cgcgccatccacgattgcggcgcgcggcgcagcaaggcgttcatcgtgcagaactgtgcg
gcgctgccggagaacctgctggagagcgaactgttcggctatcgcaagggcgcctttacc
ggcgccgaccgtgacaagcccggcctgttcgacgccgctgacggcggcacgctgttcctc
gacgagatcggcgacatgccgctgacgctgcaagccaagttattgcgcgtgctgcaggaa
ggcgaagtgcgaccgctgggctgcagcgagacgcacaaggtcgacgtgcgcatcgtcgcc
gccacccaccaggaactgcgcaagcgtgtcgaggaaggacgcttccgcgaagacctgttc
taccgcctatcgcatttccccatcgagttgccagcgctgcgcgagcgtgacgaagacatc
ctgttgctagcgcgtcacttcgccagcactgccagcggcctgctgcagcgtgacgcctgc
cgctggagcgatgccgctctggagcatctggccggctacgccttccccggcaacgtgcgt
gagctcaagggtgtggtcgagcgagccgtgctgctctgcgaaggcggcgagttgctgccc
gagcacttcaatctggagcagacccagagcgaaggcagcgaaccgctgagcctgcgcgag
cgcatggatcggctcgagcgcaacctgctgctcgactgcctgcgcaagaaccgcggcaac
cagaccaacgccgccaacgagctgggtctgccccggcgcaccctgctgtaccgcatgcaa
cggctgaagatcagcccgagcgaagtgtga

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