KEGG   Ectopseudomonas alcaliphila: UYA_00705
Entry
UYA_00705         CDS       T06680                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pall  Ectopseudomonas alcaliphila
Pathway
pall03030  DNA replication
pall03410  Base excision repair
pall03420  Nucleotide excision repair
pall03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pall00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    UYA_00705
   03410 Base excision repair
    UYA_00705
   03420 Nucleotide excision repair
    UYA_00705
   03440 Homologous recombination
    UYA_00705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pall03032]
    UYA_00705
   03400 DNA repair and recombination proteins [BR:pall03400]
    UYA_00705
Enzymes [BR:pall01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     UYA_00705
DNA replication proteins [BR:pall03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     UYA_00705
DNA repair and recombination proteins [BR:pall03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     UYA_00705
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     UYA_00705
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 NYN_YacP
Other DBs
NCBI-ProteinID: APU28303
LinkDB
Position
147291..150086
AA seq 931 aa
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPNSPFAVVFD
AKGGTFRDELFAEYKANRPSMPDELRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLAR
QAAAEKRDVVISTGDKDMAQLVCPHVTLVNTMTGSVYDADGVKEKFGVGPELIIDYLALM
GDKVDNIPGVPGVGEKTALGLLVGIGGGLDVLYANLDKVPELPIRGAKGLPAKLEEHREM
AYLSYQLATIKTDVPLNIEIESLHPGEPDQAALVELYGELEFKNWLDDLLRQNKALAAKA
AAPAGDLFAEPTDAAAEEAAEPAPASTGDYQLVLEQAHFDAWLQKLEQAELIAFDSETTS
IDAQQAQLVGLSFAVKAGEAAYIPLAHSYMGVPQQLDRDAVLKALKPILEDPAKAKVGQH
AKYDINVLANASTPIAVQGVAFDTMLESYVLDSTATRHDMDSLALKYLNHSTIRFEDIAG
KGAKQLTFDQIALEQAGPYAAEDADVTLRLHQELWGRLEAVPSLAKVLREIEIPLVPVLA
RIERNGALVDAKLLGEQSVELGEKLVELERKAFEIAGEEFNLASPKQLGVILYEKLGYPV
ISKTAKGQPSTAEAVLAELAEQDFELPKVLMQYRSLSKLKSTYTDKLPEQINPRTGRIHT
SYHQAVAATGRLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYRMMAADYSQIELRIMAHL
AKDKGLLDAFHHDLDVHRATAAEVFGVALEEVTSDQRRKAKAINFGLIYGMSAFGLAKQI
DVERKEAQAYIDRYFARYPGVLTYMESTRAQAAEQGYVETVYGRRLYLPEIHAQNQAMRK
GAERAAINAPMQGTAADIIKRAMIKVDGWLQDSGIDARIILQVHDELVLEVREELIDEVS
AKLKSLMSGAADLDVPLLVEVGVGANWDEAH
NT seq 2796 nt   +upstreamnt  +downstreamnt
atgagccaagcccccctcgttctggtcgacggttcctcgtacctgtaccgcgccttccac
gccctgccgccgctgaccacttccaagggcatgcccaccggagcggtaaaaggcgtgctg
aacatgctcaagagcctgcgcaagcagtacccgaacagccccttcgccgtggtcttcgac
gccaagggcggcaccttccgcgacgagctgttcgccgagtacaaggccaatcgcccgtcc
atgccggacgagttgcgcgtccaggtcgagccgctgcatgccagcgtgcgcgccctcggt
ctgccgctgctgtgcgtcgaaggcgtggaagccgatgacgtgatcggcaccctggcgcgc
caggcggccgcggagaagcgcgacgtggtgatctccaccggtgacaaggacatggcgcag
ctggtctgcccgcacgttacgctggtcaacaccatgaccggaagcgtctacgacgccgat
ggcgtgaaagagaaattcggtgtcggccctgagctgatcatcgactacctggccctgatg
ggcgacaaggtcgacaacatcccgggcgtgcctggtgtgggtgaaaaaaccgccctcggc
ctgctggtcggtatcggtggtggcctcgacgtgctctacgccaacctcgacaaggtgccc
gagctgccgatccgcggcgccaagggcctgccggccaagctcgaggaacaccgcgagatg
gcctacctgtcctatcaactggcgaccatcaagaccgacgtgccgctgaatatcgagatc
gaatcgctgcatcccggcgagccggatcaggccgcgctggtggagctgtacggcgaactg
gagttcaagaactggctggacgacctgctgcggcagaacaaggcgctggcggccaaggct
gcagcgccggctggcgatctgttcgccgaaccgactgacgcagccgccgaagaggccgct
gaacccgcaccggcaagcaccggtgattaccagcttgtgctggaacaggcgcatttcgat
gcctggctgcagaagctggagcaggccgagctgatcgccttcgacagcgagaccaccagc
atcgacgctcagcaggcgcagctggtcggcctgtccttcgcggtcaaggctggcgaagcg
gcctatatcccgctggcccacagctacatgggcgtgccgcagcagctcgatcgcgatgcg
gtgctcaaggcactcaagccgattctcgaggacccggccaaggccaaggtcggccagcac
gccaagtacgacatcaatgtcctggccaacgccagcacgccgattgccgtgcagggcgtg
gctttcgacaccatgctcgaatcctacgtgctggactccaccgccacccgtcacgacatg
gacagcttggcgctgaagtacctgaaccacagcaccattcgcttcgaggacatcgccggc
aagggcgccaagcaactgacctttgaccagatcgctctggagcaggccggcccctacgcc
gctgaagatgccgacgtgaccttgcgtctgcatcaggagctgtgggggcgcctcgaagcc
gtgccctccttggccaaggtgctgcgcgaaatcgagatcccgctggtgccggtgctggcg
cgcattgagcgcaacggcgcgctggtcgatgccaagctgctcggcgagcaaagtgtcgag
ctgggcgaaaaactggtggagctggagcgcaaggccttcgaaatcgctggcgaggaattc
aaccttgcctcacccaaacagctgggcgtgatcctctacgagaaactcggttatccggtg
atcagcaagaccgccaagggccagccctccaccgccgaggcagtattggccgaactggcc
gagcaggacttcgagctgcccaaggtgctgatgcagtaccgcagccttagcaagctcaag
agtacctataccgacaaactgccggagcagatcaacccgcgtaccgggcgcatccacacc
agctatcaccaggcggtggccgccactggccgtctgtcctcgagcgatccgaatctgcag
aacatcccgattcgcactgccgaaggacggcgcatccgccaggccttcgtcgcgcccaag
ggctacaggatgatggcggcggactactcgcagatcgagctgcgcatcatggctcacctg
gccaaggacaaaggcttgctcgatgccttccaccatgacctggacgtgcacagggccact
gctgccgaggtgtttggtgtggcgctggaagaggtgaccagcgatcagcggcgcaaggcc
aaggccatcaacttcggcctgatctatggcatgagtgccttcggcctggccaagcagatc
gacgtcgaacgcaaggaggcgcaggcctacatcgaccgctacttcgcccgttatccgggt
gtgctgacctacatggaaagcacccgcgcgcaggctgccgagcagggttatgtggagacg
gtctacggtcgtcgcctgtacctgccggaaatccacgcgcagaaccaggccatgcgcaag
ggcgccgagcgcgcggcgatcaacgcgccgatgcagggcactgcggcggacatcatcaag
cgcgccatgatcaaagtggacggttggctgcaggacagcggcatcgacgcgcgcatcatc
ctgcaggtgcacgacgaactggtgctggaggtgcgcgaggaactgatcgacgaggtcagc
gccaaactcaagagcctgatgagtggtgccgccgacttggacgtaccgctgttggtggaa
gtcggtgttggcgccaattgggacgaagcgcactga

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