KEGG   Ectopseudomonas alcaliphila: UYA_00805
Entry
UYA_00805         CDS       T06680                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K11384  two-component system, NtrC family, response regulator AlgB
Organism
pall  Ectopseudomonas alcaliphila
Pathway
pall02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pall00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    UYA_00805
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pall02022]
    UYA_00805
Two-component system [BR:pall02022]
 NtrC family
  KinB-AlgB (alginate production)
   UYA_00805
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 Mg_chelatase AAA VpsR cREC_REC AAA_22 AAA_19 AAA_2 MCM AAA_16 HTH_29 Tnp_22_trimer HTH_23 nSTAND3 HTH_50
Other DBs
NCBI-ProteinID: APU28323
LinkDB
Position
complement(170202..171554)
AA seq 450 aa
MAVAEQTSGRILLVDDEAAILRTFRYCLEDEGYDVAGASSATQAEALLQRQVFDLCFLDL
RLGEDNGLDLLAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCTPDQLRLAA
AKQLEVRTLAARLEALEGEVRKAKDGLDSHSPAMMAILETARQVAATDANILILGESGTG
KGELSRAIHGWSRRAKRTCVTINCPSLTAELMESELFGHARGSFTGASESTQGRVSQADG
GTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRIVAATNLDLDEMVREGRF
REDLLYRLNVITLKLPPLRERHEDVMGLAERFLARFVSDYGRPACGFSPEAAAALQAYHW
PGNIRELRNVIERASIICQSDVVEVSHLGLGGNGEAPNNAVRVGAAMSLEELEKAHIAAV
LASSNTLDMAAKTLGIDTSTLYRKRKQYNL
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggcagttgcagagcaaaccagtggacgcattctgctggtggacgacgaagcggcaatc
ctgcgtaccttccgttactgccttgaagacgaaggctatgacgtcgccggcgccagcagt
gcgacccaagccgaggcgctgctgcagcgacaggtattcgacctgtgctttctcgacctg
cgcctgggcgaggacaacggcctggacctgttggcgcagatgcgcatccaggccccctgg
atgcgcgtggtgatcgtcaccgcccactcggccgtggacaccgcggtcgatgccatccag
gccggcgccgccgactacctggtcaaaccctgcacccccgatcaattgcgcctggccgcc
gccaagcaactggaagtgcgtacgttggctgcacgcctggaggctctggaaggcgaggta
cgcaaggccaaggacggcctcgactcacatagcccggcgatgatggcgattctggaaacc
gcacggcaggtcgccgctaccgacgccaacatcctcatcctcggcgaatccggtaccggc
aagggcgagctatcgcgcgccatccacggctggagccgccgtgccaagcgcacctgcgtg
accatcaactgcccgtcactgacggccgagctgatggaaagcgaactgttcggtcacgcc
cgcggctccttcaccggtgccagcgaaagcacccagggccgcgtcagtcaggccgacggt
ggcaccctgttcctcgacgagatcggcgacttcccgctgaccctgcagcccaagctgctg
cgctttatccaggacaaggaatacgagcgcgtcggcgatccggtgacccgccgtgccgat
gtgcgcatcgtcgccgccaccaacctggacctcgacgaaatggtgcgcgagggccgcttc
cgggaagacctgctgtaccgcctcaacgtcatcaccctcaagctgccgccgttgcgcgaa
cgtcacgaagacgtgatgggcctggccgaacgctttctcgcccgcttcgtcagcgactac
gggcgcccggcgtgcggtttcagccccgaggctgccgccgccctgcaggcttatcactgg
ccaggcaatatccgtgagctgcgcaacgtcatcgagcgcgccagcatcatctgccagagc
gacgtcgtggaggttagccatctcggcctgggcggcaacggcgaagcgccgaacaacgcc
gtgcgtgtcggcgcagcgatgagcctcgaagagctggaaaaggcgcatattgccgccgtg
ctggccagcagcaacaccctcgacatggcggccaagacgctgggtatcgatacctcgacc
ctctaccgcaaacgcaagcagtacaacctctga

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