Ectopseudomonas alcaliphila: UYA_01225
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Entry
UYA_01225 CDS
T06680
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pall
Ectopseudomonas alcaliphila
Pathway
pall00300
Lysine biosynthesis
pall00470
D-Amino acid metabolism
pall01100
Metabolic pathways
pall01110
Biosynthesis of secondary metabolites
pall01120
Microbial metabolism in diverse environments
pall01230
Biosynthesis of amino acids
Module
pall_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
UYA_01225
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
UYA_01225
Enzymes [BR:
pall01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
UYA_01225
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
APU28403
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Position
complement(269264..270511)
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AA seq
415 aa
AA seq
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MEAFNYRDGELFAEGVALSALAQRFGTPTYVYSRAHIEGQYRAYADALAGRPHLVCFAVK
ANSNIGVLNVLARLGAGFDIVSSGELERVLAAGGEPSRIVFSGVGKSRDDMRRALEVGVH
CFNVESSVELERLQKVAAELGVKAPVSLRVNPDVDAGTHPYISTGLKENKFGIDIEQAEA
VYARAAELPNLEVIGVDCHIGSQLTTLEPFLDALDRLLLLVDKLAARGITIKHLDLGGGL
GVQYRDEQPPLAGDYITAVRKRLQGRDLGLVFEPGRFIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMNVSPVQPREGEARNYDLVGPICETGDFLAKDRQLVLAEGD
LLAVRSAGAYGFVMSSNYNTRGRAAEVLVDGEQAYEVRRRETVQELYAGESLLPA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaagccttcaactaccgcgacggtgagctgttcgcggaaggcgttgccttgtccgcg
ctggcccagcgcttcggcacgcccacctacgtctattcccgcgcccatatcgaagggcag
taccgcgcctatgccgatgccctggccggcaggccgcacctggtctgcttcgcggtcaag
gccaactccaacatcggcgtgctgaacgtgctggcacgcctcggcgccggcttcgacatc
gtttccagcggtgagctggagcgcgtcctggccgccggtggcgagccgagccgcatcgtc
ttctccggcgttggcaagagccgcgacgacatgcgccgcgccctggaagtcggcgtgcac
tgcttcaacgtcgagtccagcgtcgagctggagcgcctgcagaaggtcgctgccgaactg
ggcgtcaaagcgcccgtctcgctgcgggtcaacccggacgtggacgccggcacccacccg
tacatttccaccggcctcaaggaaaacaagttcggcatcgacatcgagcaggccgaggcg
gtctacgcccgcgctgccgagctgccgaacctggaagtgatcggcgtcgactgccatatc
ggttcgcagttgaccaccctcgaacccttcctcgatgccctggatcgcctgttgctgctg
gtcgacaaactggccgcgcgcggtatcaccatcaagcatctggatctcggtggtggcctt
ggcgtgcagtaccgcgacgagcagccgccgctggccggcgactacatcaccgccgtgcgc
aaacgcctgcaaggtcgcgacctgggcctggtgttcgaaccgggccgctttatcgtcgcc
aacgccggcgtgctgctgacgcaggtggaatacctcaagcacaccgagcacaaggacttc
gccatcgtcgatgcggcgatgaacgatctgatccgccctgccctgtatcaggcgtggatg
aacgtgtcgccggtgcagccgcgtgaaggcgaggcacgcaactacgacctggtcggaccg
atctgcgagaccggcgacttcctggccaaggatcgtcagttggtgctggccgagggtgac
ctgctggccgtgcgttcggcaggcgcctatggcttcgtcatgagctccaactacaacacc
cgcggccgcgccgccgaggtgctggtggatggcgaacaggcttatgaagtgcgtcgtcgc
gagacagtccaagagctctatgccggcgaaagcctgctgccggcctga
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