Ectopseudomonas alcaliphila: UYA_02465
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Entry
UYA_02465 CDS
T06680
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pall
Ectopseudomonas alcaliphila
Pathway
pall03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UYA_02465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pall03400
]
UYA_02465
Enzymes [BR:
pall01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UYA_02465
DNA repair and recombination proteins [BR:
pall03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UYA_02465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
WHD_PriA
AAA_30
AAA_22
Zn_ribbon_6
AAA_16
iSirtuin
Zn_ribbon_TiaS
TrwB_AAD_bind
AAA_25
DUF2428
AAA_19
Motif
Other DBs
NCBI-ProteinID:
APU28643
LinkDB
All DBs
Position
complement(541661..543880)
Genome browser
AA seq
739 aa
AA seq
DB search
MPNLILRLALPSPLRRLFDYLAPAGVSRSALQPGARLRVPFGRREMIGVLVEVDSQSDVP
TDKLKPALELLDARPPLPASLFKLCLWTAQYYQHSLGDTLSWALPVLLRQGEPAETRQER
YWLANKGASVDDPRLARAPRQRDALKALAQHPHGVAHSLLSQLQLNRDSLQLLHEKGLVR
VEVRRTQPHAKPAHWLAQPELPLNAEQRAAVNAVASGWGQFNAFLLAGVTGSGKTEVYLQ
LIHQCLEAGKQALVLIPEINLGPQTFDRFARRFNARIALLHSAVNDRERLDAWLAARDGE
ADIIIGTRSALFTPMKNPGLIIVDEEHDASYKQQEGLRYHARDLALVRARQEDVPIVLGS
ATPSLESLHNAYTGRYALLKLTQRAGGASQPRFLRLDVKSRPLDSGISGPMQQAIAQTLA
AGQQVLVFLNRRGFAPTLLCHDCGWLSECPRCDARMTVHQRYQELRCHHCGHVEKQPSNC
PKCQHVDLRPVGAGTERAEERLAVLFPDYPVLRVDRDSTSRKGAMDRLFATINKGEPCIL
VGTQMLAKGHHFPRVTLVSILDADGGLFSADFRASERMAQLIVQVAGRAGRAEEPGKVII
QSHLADHPLLVQLTEQGYFAFAEQALSERRSAGLPPFCHLALLRAEAHKPGQAESFLDEA
CSEAEHLLGELGLTGIELLGPVPAPMERRAGRFRAQLLLQGNARAPLHRLLNHWLHALEQ
MPSGRAVRWSLDVDPIDLF
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
ttgcccaacctgatcctgcgcctcgccctgccctcgccactgcgccgcctgttcgactac
ctcgcccctgccggcgtgtcgcgcagcgccttgcagccaggcgcacgcctgcgcgtgccc
ttcggccggcgcgagatgatcggcgtgctggtggaagtcgacagccagagcgacgtcccg
acggacaagctcaagcccgccctggaactgctcgacgcccgcccaccgctgccggcgtcg
ctgttcaagctgtgcctgtggacggcgcagtactaccagcacagcctcggcgacactctg
agctgggccttgcccgtgttgctacgccagggcgagccggccgaaacccgccaggagcgc
tactggctggccaacaaaggcgccagcgtcgacgacccacgcctggcccgcgcgccacgc
cagcgcgacgcgctcaaggcactggcgcaacatccgcacggtgtcgcccacagcctgctc
agccagttgcaactcaaccgcgacagcctgcaattactgcatgagaagggactggtacgg
gtcgaggtgcgccgcacccagccgcatgccaagccggcgcactggctggcacaaccggaa
ctgccgctgaacgccgagcagcgcgctgcggtgaatgccgtggcgtcaggctggggccag
ttcaatgcctttctactggctggcgtcaccggcagcggaaaaaccgaggtgtacctgcaa
ctgatccaccaatgcctcgaggccggcaagcaggcgctggtgctgatccccgagatcaac
ctcggcccacagaccttcgaccgtttcgcccgccgcttcaatgcacgtatcgccctgctg
cattcggcggtgaacgaccgcgagcgcctcgacgcctggctggcggcacgcgatggcgag
gccgacatcatcatcggcacccgctcagctctgttcacgccgatgaagaacccggggctg
atcatcgtcgacgaagaacacgacgcctcctataaacagcaggaaggtctgcgctaccac
gcccgcgacctggcgctggtgcgcgcccgccaggaagacgtgcccatcgtcctcggctcg
gccacaccttcgctggaaagcctgcacaacgcctacaccggccgctatgccctgctcaag
ctgacacagcgcgccggcggcgccagccagccgcgcttcctgcgtctggacgtgaagagc
cggccactggactcgggcatctccgggccgatgcagcaggccatcgcccagaccctcgcc
gccggccagcaggtgctggtgtttctcaaccgccgcggcttcgccccgaccctgctctgc
cacgactgcggctggctgtccgaatgcccacgctgcgacgcacgcatgaccgtgcaccag
cgctatcaggaactgcgctgccatcactgcggccacgtcgagaaacagccgagcaactgc
ccaaaatgccaacacgtcgacctgcgcccggtcggcgccggcaccgagcgcgccgaagag
cgcctggcggtgctgtttcccgactacccggtgctgcgcgtcgaccgcgacagcacctcg
cgcaagggcgccatggatcgcctgttcgccaccatcaacaagggcgagccgtgcatcctg
gtgggcacccagatgctcgccaaggggcatcactttccacgggtgaccctggtgtcgatc
ctcgacgccgacggcggcctgttttccgccgattttcgcgccagcgagcgcatggcgcag
ttgatcgtgcaggttgccggtcgcgctggccgcgccgaggaaccgggcaaggtgatcatc
cagagccacctggccgaccatccgttgctggtgcaactgaccgagcaaggctacttcgcc
ttcgctgaacaggcgctgagcgaacgccgcagtgccggtctgccaccgttctgccacttg
gcgttgctgcgcgccgaagcgcacaagcctggccaggccgagagttttctcgatgaggcc
tgcagcgaggccgaacatttgctgggcgaactgggtctgaccggcatcgaactgctcgga
ccggtgccggcaccgatggaacgccgcgccgggcgcttccgcgcgcaactgctgctgcag
ggcaatgcccgtgcgccattgcatcgcctgctcaaccactggctgcatgcgctggaacaa
atgcccagcggccgtgcggtacgctggtcgctggatgtcgacccgatcgaccttttctga
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