Ectopseudomonas alcaliphila: UYA_03675
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Entry
UYA_03675 CDS
T06680
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pall
Ectopseudomonas alcaliphila
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pall03400
]
UYA_03675
DNA repair and recombination proteins [BR:
pall03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
UYA_03675
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DUF7125
AAA_16
DnaB_C
AAA_22
SLFN-g3_helicase
AAA
GvpD_P-loop
nSTAND3
Rad51
nSTAND_NTPase5
AAA_24
RecA_N
AAA_14
NTPase_1
MCM
NB-ARC
AAA_29
DUF7129
Motif
Other DBs
NCBI-ProteinID:
APU28875
LinkDB
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Position
832455..833813
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AA seq
452 aa
AA seq
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MAKAKRMYGCTECGANFPKWAGQCGECGAWNTLVETVVEGATPSGRTGWAGDKANIKTLA
EVSVEEIPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIATRFPALY
VTGEESQQQVAMRARRLDLPQDKLKVMTETCIESIIATARQEKPKVMVIDSIQTIFTEQL
QSAPGGVAQVRESAALLVRFAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFEGES
DGRLRLLRAVKNRFGAVNELGVFGMTDKGLKEVSNPSAIFLTRAQEAVPGSVVMATWEGS
RPMLVEVQALVDTSHLGNPRRVTLGLDQNRLAMLLAVLHRHGGIPTYDQDVFLNVVGGVK
VLETASDLALMAAVISSLRNRPLQHDLLVFGEIGLSGEIRPVPSGQERLKEAAKHGFKRA
IVPKGNAPKEAPPGLQIVAVTRLEQALDALFE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggcaaaacgcatgtacggctgcaccgagtgcggcgccaacttccccaaatgg
gcagggcagtgtggggagtgtggcgcctggaataccttggtcgaaaccgtggtcgagggc
gccacgcccagtgggcgcactggctgggccggcgacaaggccaatatcaagaccctggct
gaggtcagtgtcgaggaaatcccgcgtttttccaccgcttccggtgaactggatcgggtg
ctcggtggcggcctggtggatggctcggtggtgctgatcggtggcgatccaggcatcggc
aagtcgaccatcctgctgcagaccctgtgcaatatcgccacgcgttttcccgccctttac
gtcaccggtgaggaatcgcagcagcaggtggccatgcgtgcgcggcggctggatctgccg
caggacaagctcaaggtgatgaccgaaacctgcatcgaatcgatcatcgccaccgcccgc
caggaaaaacccaaggtcatggtcatcgactcgatccagaccatcttcaccgagcaactg
cagtcggcgccaggcggcgtggcccaggtgcgcgagagtgcggcgctgctggtgcgcttc
gccaagcagagcggcacggcgatctttctcgtcggccacgtcaccaaggagggcgcgtta
gccggcccgcgcgtgctggagcacatggtcgacaccgtgctgtatttcgagggtgagtcc
gacggtcgcctgcgcctgctacgggcggtgaagaaccgtttcggcgcggtcaacgaactg
ggtgtgttcggcatgaccgacaagggcctgaaggaagtctccaatccctcggcgatcttc
ctcacccgcgcgcaggaggccgtgcccggcagcgtggtgatggctacctgggaaggctcg
cgaccgatgctggtggaggtgcaggcgctggtcgacaccagtcatctgggcaatccgcgc
cgcgtcaccctgggcctggatcagaaccgcctggccatgctgctggcggtactgcaccgc
cacggcggcattccgacctatgaccaggacgtgttcctcaacgtggttggcggggtcaag
gtgctggaaacggcgtccgacctggcactgatggcggcggtgatctccagcctgcgcaac
cggccgctgcaacatgacctgctggtgttcggcgagattggtctgtccggcgagattcgt
ccggtgccgagcggtcaggagcgtctgaaggaggcggccaagcatggtttcaagcgcgcc
atcgtgcccaagggcaatgcccccaaggaagcaccgccgggtttgcagatagtagccgtc
acgcgcctggaacaggcgctggatgcgcttttcgagtaa
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