Ectopseudomonas alcaliphila: UYA_05410
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Entry
UYA_05410 CDS
T06680
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pall
Ectopseudomonas alcaliphila
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pall03000
]
UYA_05410
Transcription factors [BR:
pall03000
]
Prokaryotic type
Helix-turn-helix
LysR family
UYA_05410
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
PBP_like
HTH_24
HTH_23
Motif
Other DBs
NCBI-ProteinID:
APU29198
LinkDB
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Position
1214065..1214949
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AA seq
294 aa
AA seq
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MTVKQLRAFLAVAQSLSFAQACERLHLSQPALSLAIKNLEQSLGGQLLARTTRSVALTPE
GETLLPIAVRLLADWDNAEDLLRQHFTLQMGKVAVAAMPSFAGNRLPAALRAFRDAYPRV
NVAVHDVINEQVMEMVRDGRVELGIAFEPATLDGLQFTPLYEDRFVAVVPVASELAGQAA
LTWAQLLEQPFITLQRPSAVRLLLEDSVISSHGKLPVAFESHQLVTVGRMVAEGLGVSAV
PQLCRQQMEELGARCLPLSEPQVSRRVGLLHQAGHQLSSAAQALSEVLLHQAGQ
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcaagcagctacgcgcttttctcgccgtggcgcaaagcctgagcttcgcccag
gcctgcgagcgcctgcatctgtcgcaaccggcgctgagcctggcgatcaagaacctggaa
caatcgctcggcggccagttgctggcgcgcaccacccgcagcgtggcgctgacgcccgag
ggcgagacgctgttgccgattgccgtgcgcctgctggccgactgggacaatgccgaggac
ctgctgcgccagcacttcactttgcagatgggcaaggtggcggtggcagccatgccgtcg
ttcgccggcaaccgcctgccggcggcactacgcgcctttcgcgacgcctacccacgggtc
aacgtggcggtgcacgacgtgatcaacgaacaggtgatggagatggtgcgcgacggtcgc
gtcgagctgggcatcgccttcgaaccggcgaccctcgatggcctgcagttcaccccgctg
tacgaggaccgtttcgtcgccgtggtgccggtcgccagcgagctggccgggcaagcggcg
ctaacctgggcacagttgctggagcagcctttcatcaccctgcaacggccttcggcggtg
cgcctgctgctggaagacagcgtgatctccagccacggcaagctgccggtggcgttcgag
agtcatcagttggtcacggtcgggcgcatggttgccgaaggcctcggcgtcagcgccgtg
ccgcaactgtgccggcagcagatggaagaactgggcgcccgctgcctgccgctcagcgaa
ccacaggtgtcgcgtcgcgtcggcctgctgcaccaggctgggcatcagctgtccagcgcg
gcgcaggccttgagcgaggtgctgctgcatcaggccgggcagtag
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