Ectopseudomonas alcaliphila: UYA_05640
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Entry
UYA_05640 CDS
T06680
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pall
Ectopseudomonas alcaliphila
Pathway
pall03030
DNA replication
pall03430
Mismatch repair
pall03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UYA_05640
03430 Mismatch repair
UYA_05640
03440 Homologous recombination
UYA_05640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pall03032
]
UYA_05640
03400 DNA repair and recombination proteins [BR:
pall03400
]
UYA_05640
Enzymes [BR:
pall01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UYA_05640
DNA replication proteins [BR:
pall03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UYA_05640
DNA repair and recombination proteins [BR:
pall03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UYA_05640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
Motif
Other DBs
NCBI-ProteinID:
APU32778
LinkDB
All DBs
Position
1266551..1267906
Genome browser
AA seq
451 aa
AA seq
DB search
MAVVEVKTTGAHPARDAIWELAIIQVDAEGCVAERLHWLFEPGVALPSQLLSLSGLHPLE
LRGQPRIDSEAQAIADAICGRVLVGHNLRFSLAFLRRVLPDWKTLRSAQLCTLRLARAAL
PELASAGFDALCAHFGITRFFRDRAVPDAEAVLTLARHLLQQVAPTALGHQLRSAARPPL
LAAERFAQLPERPGVYYFLGDGGAQLYVGKSRNLRRRVMSHFQNDHRDRRSLQMMQQIRD
VQVAITAGELGALLFESAEIKRLQPLYNRRLRKQRELLTWALAGEPGDLHIELLQHQELT
PGLRHAGLFRSRHHARQWLLEQARQRRLCLRVLGLEEGEGACFAYQLGRCAGACCGEEPR
RVHDARLLASAERLQTQAWPWGGPVALVERDDRHGLTQWHVLDQWRHLGTVDRFERVEPL
LTKRRGGFNLDTYHILLGHLRRHPNMEIVLL
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
ctggcagtcgtggaggtgaagaccactggagcccacccggcacgtgatgccatatgggag
ctggcgatcattcaggtcgatgctgagggttgtgtcgcagagcgcttgcactggctgttc
gagcctggtgtcgcgctgccctcgcagttgctcagcctgagtggattacaccctctggaa
ttacgcggtcagccacgcatcgatagcgaagcacaggcgatagccgacgctatttgcggc
cgcgtgctggtgggccataacctgcgcttcagcctggcgttcttgcgccgagtgctgcct
gactggaagacgctgcgctctgcgcagctgtgcactctgcgcctggccagggcggcgctg
ccggagttggcgagcgccggcttcgatgcgctttgcgcgcattttggcatcacgcgtttc
ttccgcgatcgcgccgtgccggatgccgaggccgtgttgacgctggctcggcacttgctg
cagcaggtcgcgccgacggctctggggcatcagctgcgcagcgcggcgcggcccccgttg
ctggccgcggagcgtttcgcccagttgccggaacgtccgggtgtttattacttcctgggc
gacggtggtgcgcaactgtatgtgggcaagagccgcaatctgcgccgccgggtgatgtcg
cactttcagaacgatcatcgtgaccgccgcagcctgcagatgatgcagcagatccgcgat
gtgcaggtggctatcacggccggtgagctgggcgctctgctgttcgagtccgccgagatc
aagcgtctgcaacctttgtacaaccgtcgtctgcgcaagcagcgcgagctgttgacctgg
gcgctggcgggcgagcctggcgatctgcacatcgagttgctccaacaccaggagttgacg
ccagggctccggcatgccggtttgttccgctcgcgccatcacgcgcgtcagtggctgctg
gagcaggcgcggcagcgacgcttgtgcctgcgtgtactcggtctggaggagggcgagggt
gcctgcttcgcctatcagcttgggcgctgtgcgggtgcctgctgtggcgaggagccgcgc
cgggtgcacgatgcgcggctgctcgccagcgccgagcgcctgcaaacccaggcttggcca
tggggcgggccggtcgcgctggtcgagcgcgatgaccggcacggcctgacccagtggcac
gtgctcgatcaatggcgccaccttggcacggtagatcgtttcgagcgggtcgagccatta
ctgaccaagcgccgtggcggcttcaacctcgacacctatcacatcctgctcggccacctg
cgccgccacccgaacatggagatcgtgctgctgtga
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