Ectopseudomonas alcaliphila: UYA_05645
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Entry
UYA_05645 CDS
T06680
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pall
Ectopseudomonas alcaliphila
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pall03400
]
UYA_05645
Enzymes [BR:
pall01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
UYA_05645
DNA repair and recombination proteins [BR:
pall03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
UYA_05645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
APU29242
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Position
1267903..1269438
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AA seq
511 aa
AA seq
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MSVRRLILILGDQLTPGLGALEDIDPDHDHVLLAEVMEEASHVPHHPKKIALIFSAMRHF
AEALREQGLQVHYVALDDPDNTGSLPGELLRWTQRLDPAEVHLTECGDWRLEQALRHCGV
PIHWHQDSRFLCSRDAFAAWAKGRKQLRMEFFYREMRRDSGLLLNPDGTPEGGAWNFDAD
NRKSLPKGVRPPAPLRVEPDAITRDVLTLVGQRFANHYGSLEGFDYPVTAEQAERLWQHF
LDNGLADFGDYQDAMADGAPFLFHSRISAALNIGLLDLRRICAEVEAAYRADDVPLNAAE
GFIRQLIGWREYVRGIYWLRMPEYAEGNRFGNTRALPEFYWTGKTRMNCMRQAIGQTLEH
AYAHHIQRLMITGNFALLAGIAPKAICDWYLAVYMDAFDWVELPNTLGMVMHADGGYLGS
KPYCASGQYIKRMSNHCQGCSYKVSESTGESACPFNALYWHFLMRHREPLERNPRIGMVY
RNLARMTEAKQQALWDWGERLLAKLDAGEML
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgttcgtcgtctgattctcattctgggcgaccagctcacccccggccttggtgcg
ttggaggacatagacccggaccacgaccacgtgctgctggccgaggtgatggaagaggcc
agccatgtgccgcatcacccgaagaagatcgcgctgattttcagcgccatgcgtcatttc
gccgaagccttgcgtgagcagggcctgcaggtgcactacgtggccctggatgatcctgac
aacacgggttcgttgccgggcgagctgctgcgctggacgcaacggctcgacccggccgag
gtgcatctgaccgagtgcggcgactggcgcctggagcaggcgctgcgtcattgcggcgtg
ccgattcactggcatcaggacagccgctttctctgcagccgcgatgcgttcgctgcctgg
gccaaggggcgcaagcagctgcgcatggagttcttctatcgcgagatgcgtcgtgacagc
gggctgctgctcaaccctgacggcacaccggagggcggtgcctggaacttcgacgccgac
aaccgcaagtcgttgccaaaaggcgtgcgcccacccgcgccactgcgcgtcgagcctgac
gccatcacgcgtgacgtgctgaccttggtcgggcagcgtttcgccaaccattacggcagc
ctggagggtttcgattacccggtaacggctgagcaggccgagcgcctctggcagcatttt
ctcgacaacggcctggccgactttggtgactatcaggacgccatggccgatggcgcaccc
tttctctttcactcgcgcatcagcgccgcgctgaatatcggcctgctcgatctgcgccgt
atctgcgccgaggtggaggcggcctatcgcgccgatgacgtgccgctgaacgccgccgaa
ggcttcatccgtcaactgatcggctggcgcgagtacgtgcgcggcatctactggctgcgc
atgccggagtacgccgagggcaaccgtttcggtaatacacgtgcgctgccggagttctac
tggaccggcaagacacggatgaactgcatgcgtcaggccatcggccaaaccctggaacat
gcctacgcgcaccatatccagcgcttgatgatcaccggcaacttcgccttgctcgcgggt
atcgcgcccaaggccatctgcgactggtacctggccgtgtacatggacgccttcgactgg
gtggaactgcccaacaccctgggcatggtgatgcatgccgacggtggctacctcggttcc
aagccgtattgcgccagcggccagtacatcaagcgcatgtccaaccattgccaaggctgt
agctacaaggtgagcgagagcactggcgagtcggcttgcccgttcaacgcgctgtactgg
catttcctcatgcgccaccgcgagccgctggagcgtaacccgcgtatcggcatggtctac
cgcaacctggcgcgcatgaccgaggccaagcagcaggcgctgtgggactggggcgagcgc
ctgttggcgaaactcgacgccggagaaatgctgtga
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