Ectopseudomonas alcaliphila: UYA_06380
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Entry
UYA_06380 CDS
T06680
Name
(GenBank) redox-sensitive transcriptional activator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
pall
Ectopseudomonas alcaliphila
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pall03000
]
UYA_06380
Transcription factors [BR:
pall03000
]
Prokaryotic type
Helix-turn-helix
MerR family
UYA_06380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR_1
MerR
HTH_IclR
HTH_17
HTH_7
Mcf1_ABD
DUF2489
TetR_N
NinG
Motif
Other DBs
NCBI-ProteinID:
APU29374
LinkDB
All DBs
Position
complement(1414898..1415356)
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AA seq
152 aa
AA seq
DB search
MTTSRSIHERPLSVGQIAERSGVAVSTLHFYETKGLIHSQRNAGNQRRYRRDVLRRVAII
KVAQRLGIPLADIGVALSTLPCDHMPTAADWQQLSAQWQRDLDARIEQLTRLRDQLTGCI
GCGCLSMQDCPLRNPSDELGEQGAGARLLETD
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgtcgcgctccatccacgaacgcccgctgagcgtcggccagatcgccgaacgc
agcggtgtggcggtttccacgctgcatttctacgagaccaaagggctgatccacagccag
cgcaatgccggtaatcagcgacgttatcgacgcgatgtgctgcgccgcgtcgcgatcatc
aaggtggcgcagcgcctgggcattcccctggccgatatcggtgtggcactgagcacactg
ccctgcgatcacatgccgacggcagcggactggcaacaactgtcggcgcaatggcagcgc
gacctggatgcgcgcatcgagcagctaacgcggctgcgcgaccagctcactggctgtata
ggttgcggttgcctgtcgatgcaggactgcccactgcgcaaccccagcgacgaactcggc
gaacagggcgccggggcacgtctgctggagacggattaa
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integrated database retrieval system
