Ectopseudomonas alcaliphila: UYA_07245
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Entry
UYA_07245 CDS
T06680
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pall
Ectopseudomonas alcaliphila
Pathway
pall03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UYA_07245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pall03400
]
UYA_07245
Enzymes [BR:
pall01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
UYA_07245
DNA repair and recombination proteins [BR:
pall03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UYA_07245
Prokaryotic type
UYA_07245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
APU29533
LinkDB
All DBs
Position
1590311..1591000
Genome browser
AA seq
229 aa
AA seq
DB search
MTDDRIKLEASWKHALREEFDKPYMSELRAFLQAEKAAGKEIYPPGPLIFNALNSTPLDQ
VKVVIIGQDPYHGPGQAHGLCFSVQPGVQTPPSLVNIYKELKRDLNIDIPAHGYLQSWAD
QGVLLLNTSLTVERANAGSHAGKGWQFFTDRVIEVVSEQQPKLVFLLWGSHAQSKQRLID
PTKHLVLRSPHPSPLSAHRGFIGNGHFSRCNQFLSQNGMTPIDWRLPAL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgatcgcatcaagctcgaagccagctggaaacacgcgctgcgtgaggagttc
gacaagccttacatgagcgagctgcgtgcgttcctgcaggcggagaaggcggccggcaag
gaaatctatccgccgggtccactgatcttcaatgcgctcaactccacgccgctggatcag
gtcaaagtggtgatcatcggtcaggacccgtaccacggccccggtcaggcgcacggcctg
tgcttctcggtgcagccgggcgtgcagacgccgccgtcgctggtgaacatctacaaggag
ctcaagcgcgatctcaatatcgacatcccggcgcacggctatctgcagagttgggctgac
cagggcgtgctgctgctcaacacctcgttgaccgtcgagcgcgccaatgccggctcgcat
gccggcaagggctggcagttctttaccgaccgagtgatcgaggtggtcagtgaacagcag
cccaaactggtgttcctgctctggggcagccatgcgcagagcaaacagcgcctgatcgac
ccaaccaagcacctggtgctgcgttcgccgcatccgtcgccgttgtcggcgcatcgcggt
ttcatcggcaatggccatttcagtcgctgcaaccagttcctcagccagaacggcatgacg
cccatcgactggcgcttgccggcgctgtaa
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