KEGG   Ectopseudomonas alcaliphila: UYA_07720
Entry
UYA_07720         CDS       T06680                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pall  Ectopseudomonas alcaliphila
Pathway
pall03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pall00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    UYA_07720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pall03019]
    UYA_07720
   03009 Ribosome biogenesis [BR:pall03009]
    UYA_07720
   03036 Chromosome and associated proteins [BR:pall03036]
    UYA_07720
Enzymes [BR:pall01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     UYA_07720
Messenger RNA biogenesis [BR:pall03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     UYA_07720
Ribosome biogenesis [BR:pall03009]
 Eukaryotic type
  90S particles
   RNase
    UYA_07720
 Prokaryotic type
  rRNA processing factors
   UYA_07720
Chromosome and associated proteins [BR:pall03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     UYA_07720
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2
Other DBs
NCBI-ProteinID: APU29621
LinkDB
Position
1683089..1683778
AA seq 229 aa
MSPNLSRLERKLGYSFKDQDLMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLAVLARGFELGEYLLLGSGELKSGGFRRESILADALEALIG
AIYLDAGMDAARERVLDWLTGELDGLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDVQG
EPHCRTFMVECQVSLLNETTLGQGGSRRIAEQVAAAAALIALGVENGND
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgagtcccaacctttcccgcctcgagcgcaagctcggctatagcttcaaggatcaggac
ctgatggtcctggccctgacccatcgcagtttcgccggccgcaataatgagcggctggaa
tttctcggtgatgccatcctcaatttcgtagccggtgaggcgctgttcgagcgcttcccg
caggcccgcgaaggccagctatcgcgcctgcgcgcacgcctggtcaaaggcgagacgctg
gccgtgctggcccgcggtttcgagctgggcgaatacctgctcctgggctccggtgagctg
aaaagcggcgggttccgtcgcgagtcgattctggccgatgccctggaggcgctgattggc
gccatctatctggacgccggtatggatgcagcccgcgagcgcgtgctggactggctgacc
ggcgagctggacggcctgaccttggtcgacaccaacaaggatccgaaaacgcgactgcag
gaattcctgcaatcgcgtgcctgtgagctgcctcgttacgaggtggtggacgtacagggt
gagccgcactgccgtaccttcatggtcgagtgccaggtatccctgctcaatgaaacgacc
ctgggccagggcggcagccggcgtatcgccgagcaggtcgctgcggctgcggcgctgatc
gccctcggggtggagaatggcaatgactga

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