Ectopseudomonas alcaliphila: UYA_09880
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Entry
UYA_09880 CDS
T06680
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pall
Ectopseudomonas alcaliphila
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pall03032
]
UYA_09880
03400 DNA repair and recombination proteins [BR:
pall03400
]
UYA_09880
Enzymes [BR:
pall01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
UYA_09880
DNA replication proteins [BR:
pall03032
]
Prokaryotic type
DNA Topoisomerases
UYA_09880
DNA repair and recombination proteins [BR:
pall03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UYA_09880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
APU30027
LinkDB
All DBs
Position
2143883..2146651
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AA seq
922 aa
AA seq
DB search
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLDKETVDWVPNYDGTEQIPAVMPTKVPNLLVNGSSGIAVGMAT
NIPPHNLTEVIDGCLALMDNPELTVDDLMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI
YIRARVEVEDIDKVGGRQQLVVTELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD
GMRVVIELRRGEVPDVVLNNLYAQTQMQSVFGINVVALVDGQPKIMNLKDMLEVFIRHRR
EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKASPTPAEAKERLIATAWESSA
VEAMVERAGADSCRPEGLDAQFGLRDGKYYLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILSLIGELIRILTSPERLMEVIREELEKVKAEFGDARRTEIVASRLDLTIADLITEEER
VVTISHGGYAKSQPLAAYEAQRRGGKGKSATGVKDEDYVEHLLVANSHATLLLFSSKGKV
YWLRTFEIPEASRAARGRPLVNLLPLDEGERITAMLQIDLEALQQSAGADEDLDDEGVVI
EGEATEVVEAEEIEEVEGETPELVAEPTGAFIFMATAFGTVKKTPLVQFSRPRSAGLIAL
KLEEGDTLIAAAITDGAKEVMLFSDAGKVLRFAESKVRTMGRTARGVRGMRLGKDQQLIS
MLIPESGAQILTASERGFGKRTGLGKFPRRGRGGQGVIAMVTSERNGKLVGAIQVQDGEE
IMLISDQGTLVRTRVDEVSSSGRNTQGVTLIKLAKDETLVGLERVQEPTAVEEDELVEGE
EGAEVAESAEAPVADAEEGSEE
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcgatgagcgtgatcgtcgggcgtgcgctgccggatgcgcgcgatggc
ttgaagccagtacaccgccgtgtgctctacgccatgagcgagctgggcaacgactggaac
aagccctacaagaaatccgcccgtgtggtcggtgacgtgatcggtaaataccacccgcac
ggcgacaccgcggtgtacgacaccatcgtacgtatggcgcaggacttctccctgcgctac
ctgctggtcgacggccagggcaacttcggttcggttgacggcgacaacgccgcggccatg
cgatacaccgaagtgcgcatgaccaagctggcgcatgaactgctggccgacctggacaag
gaaaccgtcgactgggtgcccaactacgacggcaccgagcagatcccggctgtcatgccg
accaaggtgccgaacctgctggtcaacggctccagtggtatcgccgtgggcatggccacc
aacatcccgccgcacaacctcaccgaggtaatcgacggctgcctggcgctgatggacaac
cccgagctgaccgtcgatgacctgatgcagtacatccccggtccggattttcccaccgcg
ggcatcatcaatggtcgtgccggtatcatcgaggcctaccgtactggccgtgggcgcatc
tacatccgcgcccgcgtcgaggtcgaggacatcgacaaggtcggcggtcgccagcagttg
gtggtcaccgagctgccgtatcagctgaacaaggcgcgtctgatcgagaagatcgccgag
ctggtcaaagagaagaagatcgaaggcatcaccgagctgcgtgacgagtccgacaaggac
ggcatgcgcgtggtgatcgaactgcgtcgtggcgaagtgccggacgtggtgctgaacaac
ctctacgcccagacccagatgcagagcgtgttcggcatcaacgtcgtggcgctggtcgac
ggtcagccgaagatcatgaacctcaaggacatgctcgaggtgttcatccgtcaccgccgc
gaagtggtgacccgtcgtaccgtctacgagttgcgcaaggcgcgtgaacgtgggcacatc
cttgaaggccaggcggtagccctgtccaacatcgatccggtgatcgagctgatcaaggcc
tcgccgacgccggctgaggccaaggaacgcctgatcgccactgcctgggaatcgtccgcc
gtggaggccatggtcgagcgcgctggcgccgactcctgccgcccggaaggtctggatgca
cagttcggcctgcgtgacggcaagtactacctgtcgccggagcaggcccaggccatcctc
gagttgcgcctgcaccgtctgaccggcctggagcacgagaagctgctggccgagtaccag
gaaatcctcagcctgatcggcgagctgatccgcatcctgaccagccccgagcgcttgatg
gaagtcatccgcgaggagctggagaaggtcaaggccgagttcggtgatgcccgtcgcacc
gagatcgtcgcctcgcgtctggatctgaccattgccgacctgatcaccgaagaagagcgc
gtcgttacgatctcccacggtggctacgccaagagtcagccgctggccgcctacgaggcg
cagcgtcgcggcggcaagggcaagtccgccaccggggtgaaggacgaggactacgtcgag
catctgctggtcgccaacagccacgccaccctgctgctgttctccagcaagggcaaggtg
tactggctgcgtacctttgaaatccccgaagcctcgcgcgccgcgcgcggtcgcccgctg
gtcaacctgttgccgctggatgagggcgagcgcatcaccgcgatgctgcagatcgacctc
gaagcgctgcagcagagcgccggtgctgacgaagacctggacgacgaaggcgtggtgatc
gaaggcgaagccaccgaagtggtcgaggccgaggaaatcgaagaagtcgagggtgaaacc
cccgaactggtcgccgaaccgaccggcgccttcatcttcatggccaccgcattcggcacc
gtgaagaagaccccgctggtgcagttcagccgcccgcgcagcgccggcctgatcgcgctg
aagctggaagagggcgataccctgattgctgccgccatcaccgacggcgccaaggaagtc
atgctgttctccgatgccggcaaggtgctgcgtttcgccgagagcaaggtgcgcaccatg
ggccgtaccgcccgcggtgtacgcggcatgcgcctgggcaaggatcagcaactgatctcc
atgctgattccggagtccggtgcgcagatactcaccgcttccgagcgtggctttggcaaa
cgtaccggcctgggcaagttcccgcgtcgcggtcgtggcggccagggcgtgatcgccatg
gtcaccagcgagcgtaacggcaagctggtcggcgccattcaggtgcaggacggcgaggaa
atcatgctgatttccgaccagggcaccctggtgcgcacccgtgtcgacgaagtctccagt
tccggacgtaacactcagggtgtgaccctgatcaagctggccaaggacgagaccctggtt
ggcctggagcgtgtgcaggagcctactgcggtggaagaggacgaactggtcgaaggtgaa
gagggcgctgaagtcgccgaaagcgccgaagcaccagtcgccgacgccgaggaaggcagc
gaggagtga
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