Pseudomonas alcaliphila: UYA_09920
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Entry
UYA_09920 CDS
T06680
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pall
Pseudomonas alcaliphila
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pall03032
]
UYA_09920
03036 Chromosome and associated proteins [BR:
pall03036
]
UYA_09920
03400 DNA repair and recombination proteins [BR:
pall03400
]
UYA_09920
DNA replication proteins [BR:
pall03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
UYA_09920
Chromosome and associated proteins [BR:
pall03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
UYA_09920
DNA repair and recombination proteins [BR:
pall03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
UYA_09920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
CATASP
Motif
Other DBs
NCBI-ProteinID:
APU30035
UniProt:
A0A1L7FYW7
LinkDB
All DBs
Position
2155973..2156257
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AA seq
94 aa
AA seq
DB search
MTKSELIERIVTHQGQLSSKDVELAIKTMLEQMSQALATGDRIEIRGFGSFSLHYRAPRV
GRNPKTGQSVRLDGKFVPHFKPGKELRDRVNEDE
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcggagttgatcgaaagaattgtcactcatcagggtcagctgtcctccaag
gatgtcgagttagccatcaagaccatgctggagcaaatgtcccaggcactggccacgggg
gatcgtatcgaaattcgcggctttggcagcttctcgctgcattaccgcgcgccgcgcgtt
gggcgcaacccgaaaaccggccaatctgtccgcctggatggcaagttcgtgccgcatttc
aagccgggcaaggagctgcgtgaccgggtcaatgaagacgagtaa
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