Ectopseudomonas alcaliphila: UYA_09990
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Entry
UYA_09990 CDS
T06680
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pall
Ectopseudomonas alcaliphila
Pathway
pall03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UYA_09990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pall03400
]
UYA_09990
DNA repair and recombination proteins [BR:
pall03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UYA_09990
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
UYA_09990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
APU30046
LinkDB
All DBs
Position
2172129..2174144
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFKPAGDQPEAIRQMVEGLEAGLSHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALIERKDVIVVCTVSSIYGLGSPEEYLKMVLHLDRGDKMDQRALLRRLAELQY
TRNDMDFARATFRVRGDVIDVFPAESDLEAIRVELFDDEVESISAFDPLTGEVIQKLPRF
TFYPKSHYVTPRETLLEAVEQIKVELQQRLEYLRGANKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPSGAPPPTLYDYLPDEALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFEEWEAASPQTIFVSATPGPYEGEHAGRVVEQLVRPTGLVDPQ
IEVRPARTQVDDLLSEIRLRVAAGDRVLVTTLTKRMAEDLTDYLGDHDVKVRYLHSDIDT
VERVEIIRDLRLGAFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADNMTGSMQRAIGETERRRAKQIAFNEANGIVPKGVQKDVKDILEGAVV
PGARSNKRKGMAKAAEESARYENELRSPSEITKRIRQLEEKMYALARDLEFEAAAQMRDE
IQKLRDRLLQV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtttcagttggtgacccgcttcaaacctgccggcgatcagcctgaggcgatc
cggcagatggtcgaggggctggaggccggcctttcgcaccagaccctgctgggtgttacc
ggctcgggcaagaccttctccatcgccaacgtgattgcccaggtgcagcgcccgaccctg
gtcctggcgccgaacaagaccctggcggcgcagctctatggcgagttcaaggcgttcttc
ccgaacaacgcggtggagtacttcgtctcctactacgactactaccagccggaagcctat
gtgccgtcgtcggacaccttcatcgagaaggatgcctcgatcaacgaccatatcgagcag
atgcgcctgtcagcgaccaaggcgctgatcgagcgcaaggacgtgatcgtggtctgcacc
gtgtcctcgatttacggcttgggcagccccgaggagtacctgaaaatggtgctgcacctc
gaccgtggcgacaagatggatcagcgcgcgctgctgcggcgcttggccgagctgcagtac
acgcgcaacgacatggacttcgcccgtgccactttccgcgtgcgcggtgatgtgatcgac
gtcttcccggcggaatcggatctggaagccattcgcgtcgagctgttcgatgacgaggtg
gaaagcataagcgccttcgacccgctgaccggcgaggtgatccagaagctgccgcgcttc
accttctatcccaagagccactacgtcacgccgcgtgaaaccttgctggaggcggttgag
cagatcaaggtcgagctgcagcagcgtctggagtacctgcgcggtgccaacaagctggtg
gaggcgcagcgcctggagcagcgcacgcgcttcgatctggagatgatcctcgagctgggc
tattgcaacggcatcgagaactactcgcgctacctgtcgggccggccatctggagcgccg
ccacccactctctatgactacctgccggacgaagcgctgctggtgatcgacgagtctcac
gtttcggtgccgcaggtcggcgccatgtacaagggcgaccgttcgcgtaaggagacgctg
gtggaatacggcttccgtctgccttctgcgctggataaccgaccgatgcgtttcgaggag
tgggaggcggccagcccgcagaccattttcgtttccgctacgcctgggccttacgagggc
gagcatgccgggcgcgtggtggagcagttggtgcggccgaccggcctggtcgacccgcag
atcgaggtgcgtccggcgcgcactcaagtggatgacctgctctcggagatccgtttgcgt
gtggcagcgggtgaccgcgtgttggtcaccacgctgaccaagcgtatggccgaggacttg
accgattacctgggtgaccatgacgtcaaggtgcgttacctgcactcggacatcgatacc
gttgaacgggtggagatcattcgtgacctgcgcctgggcgccttcgacgtgctggtgggg
atcaacctgctgcgtgagggcctggacatgcccgaggtgtcgttggtggcgattctcgac
gcggacaaggaaggcttcctgcgtagcgagcgctcgctgatccagaccattggtcgcgcc
gcacgtaacctcaacggtcgggcgattctgtacgccgacaacatgaccggctcgatgcag
cgcgccattggcgagaccgagcggcgccgcgccaagcagatcgccttcaacgaagccaac
ggcatcgtgcccaagggcgtgcagaaggacgtcaaggacattctcgaaggcgccgtggtg
ccgggggcgcgcagcaacaagcgcaagggcatggccaaggcagcggaggagagcgcgcgt
tacgagaacgagctgcgttcgccgagcgagatcaccaagcgtattcgtcagctggaagag
aagatgtacgccctggcgcgcgatctggagttcgaggccgcagcgcagatgcgtgacgag
attcagaagctgcgcgatcggttgttgcaggtgtga
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