Ectopseudomonas alcaliphila: UYA_13425
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Entry
UYA_13425 CDS
T06680
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
pall
Ectopseudomonas alcaliphila
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pall03032
]
UYA_13425
03036 Chromosome and associated proteins [BR:
pall03036
]
UYA_13425
03400 DNA repair and recombination proteins [BR:
pall03400
]
UYA_13425
DNA replication proteins [BR:
pall03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
UYA_13425
Chromosome and associated proteins [BR:
pall03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
UYA_13425
DNA repair and recombination proteins [BR:
pall03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
UYA_13425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Barstar
HU-CCDC81_euk_2
DUF5878
Motif
Other DBs
NCBI-ProteinID:
APU30676
LinkDB
All DBs
Position
complement(2922242..2922514)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDAIAASADIPKAVAGRALDAVIESVTGALKAGDSVVLVGFGTFAVKERAARTG
RNPQTGKPISIAAAKIPGFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcggaactgatcgatgccatcgctgcatctgctgatatcccgaaagctgtt
gctggccgcgcgctggatgcagtgattgaatccgtcactggcgctctgaaggctggtgac
tccgttgtgctggtaggcttcggtaccttcgctgtcaaagagcgtgctgctcgcactggt
cgcaacccgcagaccggcaagccgatcagcatcgctgctgccaagatcccaggcttcaaa
gctggcaaggctctgaaagacgccgtcaactaa
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integrated database retrieval system
