Ectopseudomonas alcaliphila: UYA_13970
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Entry
UYA_13970 CDS
T06680
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pall
Ectopseudomonas alcaliphila
Pathway
pall03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UYA_13970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pall03400
]
UYA_13970
Enzymes [BR:
pall01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
UYA_13970
DNA repair and recombination proteins [BR:
pall03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UYA_13970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
APU30766
LinkDB
All DBs
Position
complement(3042771..3046184)
Genome browser
AA seq
1137 aa
AA seq
DB search
MPASPELSPGLIVIHGNHLEELRALAVQWMRRYPLRPLENEVLLVQSNGIAQWLKLALAE
RDGCGIAAALDVDLPARFLWQAYRNVLGKDAIPQQSPLDKAPLTWRLMRLLPGLLAEEAF
APLRRFLADDQDLRKRHQLAERLADLFDQYQVYRADWLADWAGGQDRLRTSRGGERVLEG
DSRWQPALWRALLADVGAQHLAESRAGVHPRFVARMGEMDAAPPGLPRRVTVFGISSLPA
QVLEALAAMARFSQVMLYVHNPCQHHWGDIVEDKDLLRHEYRRQQRKGRPGAQIGLFEQE
DMHQHGQPLLAAWGKQGRDYINLLDQYDEPQRYREQFERIDLFSPASEGSLLGQLQNDIL
DLRPLAETRSTWSPVDLKRDHSLRFHIAHSAQREVEILHDQLLASFSEDATLRPRDVIVM
VPDVNAYAPHIQAVFGQFASDDPRFIPFTLADQGLRGKEPMIIALEHLLRLPDSRFSVSE
ILDLLDVAALRQRFAIAEDQLPTLRRWLEGAGVRWGLDSSQRQSLGLGENLEQNTWRFGL
RRMLLGYAVGTGDAFAGIEPYDEIGGLDAALIGPVTRLLESLDRHLQQLREPATPVQWGE
RLRSLLDDFFQPQSDREEVLTTQLLDALDAWLELCEAATLEEALTLPVVREAWLGGLDQG
RLSQRFLAGAVNFCTLMPMRAIPFRQVCLLGMNDGDYPRSQAPLDFDLMAGDYRPGDRSR
REDDRYLLLEALLAARDRLYISWVGRSIRDNSERPPSVLVGQLRDHLASAWTLAGGGDLL
HGLTTEHPLQPFSRRYFDGQGQLFSYAHEWAALHGQVSTRESAPPLPAWEEGQQLTPELL
QSFLRDPVKCFFTRRLKVYLDEEEQAQLDSEPFALDGLQRYHLQEILLKAAVAGDVDSDD
ALRAAADRLQRSGVLPLAGFGEQYRNALLEPLPAQVQRYQGLCLCWPSLLESPQRLTFAA
AGVQLDGWLAGLRQKADGGLARLELLPGALHKDKSWKWHRLLRPYALHVIAAACGVPLTT
LLVGEDRSLAFEPLPTEHAARVLTTWLEAWNAGMQTPLPVALKTSLAWLQDNNEDKARSI
YEGGYNLSGEVQGSASLARQFPDYTALTADGQFPAWSERLYQPLLDSNPQALEEDAA
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccagcccggagttgtcccccggccttatcgtcattcacggcaatcacctcgaa
gagctgcgtgcgctggcggtgcagtggatgcgacgctatccattgcggccgctggagaat
gaggtactgctggtgcagagcaacggcatcgcccagtggctcaagctcgcgttggccgag
cgtgacggctgtggcatcgcggcggcgctggacgttgacctgccggcgcgctttctctgg
caggcgtaccgcaacgtgctgggcaaggacgcgattccgcagcagtcgcccctggacaag
gcgccgctgacctggcgcctgatgcgcctgttgccgggcctgctggccgaggaggcgttt
gcgcccttgcgccgctttctcgccgatgaccaggatctgcgcaagcgccaccaactggcc
gagcgcctggccgatctgttcgaccaatatcaggtctaccgtgccgactggctggcggac
tgggccggcggacaagaccgcttgcgcacctcgcgcggcggcgaaagggtgctggagggc
gactcccgttggcaacccgcgctgtggcgcgccttgctggcagatgttggcgcgcagcac
ctggccgaaagtcgcgccggcgtgcatccgcgtttcgtcgctcgaatgggcgagatggat
gcagcgccgcccggactgccccgacgtgtcaccgttttcgggatatcgtcgttgccggcc
caggtgctggaggcgctggcggccatggcgcgtttcagccaggtcatgctctacgtgcac
aacccctgtcagcaccactggggcgatatcgtcgaagacaaggatctgttgcgccacgaa
taccgccgccagcagcgcaagggcagaccaggcgcgcagatcggtctgttcgagcaggag
gacatgcatcagcacggacaaccgctgctcgctgcctggggcaagcaggggcgcgactac
atcaacctgctggatcagtacgacgagccgcagcgttaccgcgagcagttcgagcgcatc
gacctgttcagccctgccagtgagggcagcctgctcggccagctacagaacgacatcctc
gacctgcgcccgctggcggaaacgcgtagcacctggtcgccggtcgacctgaaacgtgat
cattcgttgcgttttcatatcgcccacagtgctcagcgcgaagtggaaattctccacgat
cagctgctggccagtttcagcgaggacgccacgctaaggccgcgcgacgtgatcgtcatg
gtgccggacgtcaatgcctacgcaccgcatatccaggcagtgttcggccagttcgccagt
gacgacccgcgtttcattcccttcaccctggctgatcagggactgcgcggcaaggagccg
atgatcatcgcgctggagcatttgctgcgcctgccggacagccgcttcagcgtcagtgag
atactcgacctgctggatgtcgccgcgttgcgtcagcgcttcgccatcgccgaggatcag
ctgcccaccctgcgccgctggttggagggcgccggtgtgcgctgggggctggattcgagt
cagcggcagtcgctgggcctgggcgagaacctggagcagaacacctggcgtttcggtctg
cggcgcatgttgctgggctacgcagtgggtacgggcgacgccttcgccggcatcgagccg
tacgacgagatcggcgggctcgatgctgcgctgatcggcccggtgacgcgcctgctggaa
agcctcgaccggcatctgcagcaactgcgcgagccggccacgccggtgcagtggggcgag
cgcctgcgaagtttgctcgacgacttctttcagccgcagagcgaccgtgaagaggtgctg
acgacccaactgctcgatgcgctggatgcctggctggagctgtgcgaggcggcgacgctg
gaagaagcgctgaccctgccggtggtgcgcgaagcctggctgggcgggctcgaccagggg
cggctgagccagcgttttctcgccggtgcggtgaatttctgcaccctgatgccgatgcgc
gcgattccgttccgccaggtctgcctgctgggcatgaacgatggcgactatccgcgcagt
caggcaccgctggatttcgacctgatggctggcgactaccgccccggtgaccgctcgcgt
cgcgaggatgatcgctatctgctgctcgaggcactactggcggcgcgtgatcgtctctat
atcagctgggtagggcgcagcattcgcgataacagcgagcggccgccgtccgtgctggtc
ggccagctgcgtgaccatcttgccagcgcctggacactcgccggtggcggcgacctgctg
catggcctgaccaccgagcaccccttgcaaccgtttagccgccgctacttcgatggccag
gggcagctgttcagttatgcccacgagtgggcagccctgcatggccaggtctcgacccgc
gaaagtgctccgcccttgccggcctgggaggagggacaacagctcacgcccgagctgttg
cagtcgttcctgcgcgatccggtgaagtgtttcttcacccgtcggctcaaggtgtatctc
gacgaagaagagcaggcgcagctcgacagcgaacccttcgccctcgacggcctgcagcgc
taccacttgcaggaaatcttgctcaaggcggcggtagcaggtgacgtggacagcgacgat
gcgctgagggcggcagccgatcgcctgcaacgcagcggcgtgctgccgctggccggtttc
ggcgagcagtatcgcaacgctttgctggagccgctgccggcgcaggtgcagcgctaccag
gggctttgcctgtgctggccgagcctgctggagtcaccgcagcgcctgactttcgccgca
gccggtgttcagctcgatggctggcttgccgggctgcggcagaaggccgatggcggcctg
gcgcgtctggagctgctgccgggtgcgttgcataaggacaagagctggaagtggcatcgc
ctgctgcggccctatgcgttgcacgtcatcgcggcggcttgtggtgtgccgctgaccacc
ttgctggtcggcgaggatcgcagtctggcgttcgaacccctacctacggagcacgcagcc
cgcgtactgaccacttggctggaagcctggaacgccggtatgcagacgcctctgccggtc
gccctgaaaacctcgctggcctggttgcaggacaacaacgaggacaaggctcgcagcatc
tacgagggaggctacaacctctccggtgaagtccagggcagtgccagcctggcgaggcag
ttcccggactacaccgcgctcaccgccgatggccagtttccggcatggagcgaacggctc
taccagccgctgcttgatagcaacccccaggcgctcgaagaggacgcagcatga
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