Ectopseudomonas alcaliphila: UYA_14000
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Entry
UYA_14000 CDS
T06680
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pall
Ectopseudomonas alcaliphila
Pathway
pall00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
UYA_14000
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pall01007
]
UYA_14000
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pall03016
]
UYA_14000
Enzymes [BR:
pall01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
UYA_14000
Amino acid related enzymes [BR:
pall01007
]
Aminoacyl-tRNA synthetase
Class II (U)
UYA_14000
Transfer RNA biogenesis [BR:
pall03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
UYA_14000
Prokaryotic type
UYA_14000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
APU30771
LinkDB
All DBs
Position
complement(3048138..3050516)
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AA seq
792 aa
AA seq
DB search
MKFSEQWLRSWVNPDVSREDLVARLSMVGLEVDAVQPVAGAFSGIVVGEILSAEQHPDAD
KLRVCQVSNGSETFQVVCGAPNARAGIKIPFAMIGAELPGDFKIKKAKLRGVESQGMLCS
ASELQISEDNSGLMELAADAPVGSDIRAYLQLDDASIEIGLTPNRGDCLSLAGLAREVGA
MYSAAVSPVAIDAVAPAHDEVRPVEVLAPKACPRYLGRVVRNVDLSRPTPLWMVERLRRS
DIRSIDAAVDITNYVMLELGQPMHAFDLAEISGGIRVRMAEEGEKLVLLDGQEVSLRADT
LVIADHSRALAIAGVMGGEHSGVSEKTRDLFLESAFFDNIAVAGKARSYGLHTDASHRFE
RGVDSQLARKAMERATALLLEIVGGEAGPVIEVSSEADLPSVAPITLRSERINQMLGMEM
DSAEVERLLTALGLGVSAQGSGQWLVSVPSHRFDISLEVDLIEELGRLYGYNRLPVRYPQ
ARLAPQAKSEARAELPALRRLLVARGYQEAITYSFIDPKLFELFTPGVEPLQLANPISAD
MAAMRSSLWPGLVKALQHNLNRQQSRVRLFESGLRFVGQLERLQQEAMLAGVITGSRLPE
GWANSRDNVDFYDLKADVEALLGYAGAADAFSFVPGEHPALHPGQTARIEREGHLVGFMG
ALHPELTKTLGLDQPVFLFELVLAEVAAGRMPVFSELSRFPEVRRDLALLVDREQPAEAV
LGAIRETAGEWLTDLKLFDVYHGKGIDPLRKSLAVGLTWQHPSRTLNDDEVSTTTQNILT
CLEQRFNATLRK
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagtgaacagtggctgcgcagttgggtgaatcccgatgtatcccgcgaggat
ctggtcgcgcgcctgtccatggtcggcctcgaagtcgacgccgtacagccggtggccggc
gccttcagtggcatcgtggtcggtgagatcctcagtgccgaacaacatccggacgctgac
aagctgcgtgtatgccaggttagcaatggcagcgagaccttccaggtcgtttgcggtgcg
cccaatgcccgcgccggtatcaagattccgttcgccatgatcggcgccgagctgccgggc
gacttcaagatcaagaaggccaagctgcgtggtgtggagtcgcagggcatgctgtgctcg
gcttccgagctgcagatcagcgaagacaacagcggtctgatggagctggctgccgatgcg
ccagtgggcagcgacattcgcgcttacctgcaacttgatgacgccagcatcgagatcggc
ctgactcctaaccgcggtgactgcctgtcgctcgccggtctggctcgcgaagtcggtgcc
atgtacagcgccgccgtttcgccagtcgctatcgacgctgttgctcctgcgcatgacgaa
gtgcgcccagtcgaggtgctcgcgcccaaggcgtgcccgcgttacctcggtcgcgttgta
cgtaacgttgacctgtcccgtccgaccccgctgtggatggtcgagcggctgcgtcgttcc
gatattcgcagcatcgatgcggcggtggatatcaccaactacgtgatgctcgagctgggc
cagccgatgcacgccttcgatcttgccgagatcagtggcggcattcgcgtgcgcatggcg
gaagagggcgaaaagctggtgctgctcgacggtcaggaagtcagcctgcgtgccgatacg
ctggtcatcgctgatcacagtcgcgctctggcaatcgcgggcgtgatgggcggtgagcac
agcggcgtgagtgagaagactcgcgacctgttcctggagagcgccttcttcgacaatatc
gctgttgccggcaaggcccgctcctatggtttgcacaccgatgcctcgcaccgcttcgag
cgcggtgtggactcgcaattggcacgtaaagcgatggagcgcgctactgcgctgctgctg
gagatcgttggcggcgaagccggcccggtcatcgaagtcagcagcgaggccgatctgccg
agcgtggcgccgatcactctgcgttccgagcgcatcaaccagatgttgggtatggagatg
gacagcgccgaggtcgagcgtctgctcaccgcgctgggtctgggtgtcagcgctcagggc
tccggccagtggctggtcagcgtgccaagtcaccgtttcgacatcagcctggaagtggat
ctgatcgaagagctgggccgcctgtacggttataaccgtctgccggtgcgctatccgcag
gcgcgcctggcgccacaggccaagtccgaggcgcgtgctgagctgcctgctctgcgtcgc
ctgttggtcgcccgtggctaccaggaagctatcacctatagctttatcgatcccaagctg
ttcgagctgttcactcctggcgtagagccgttgcaactggccaatccgatctctgccgat
atggctgccatgcgttcctcgctgtggccagggctggtcaaggcgctgcagcacaacctc
aatcgtcagcagtcgcgcgtgcgtctgttcgagagcggcctgcgttttgtcggtcagctg
gaacgtctgcagcaggaagccatgctcgccggcgtgatcaccggcagccgcctgcctgag
ggctgggccaacagccgtgataacgtcgacttctatgatctgaaagccgatgtcgaggcg
ctgctgggttatgccggtgcggctgatgcctttagcttcgtgcctggcgagcatcctgct
ctgcatccaggccagaccgctcgcatcgagcgggaagggcacctggttggcttcatgggt
gctctgcatcctgagctcaccaagaccctgggcttggatcagccggtattcctcttcgag
ctggtgctggccgaagtggctgctggtcgcatgcctgtattcagcgagttgtcgcgcttc
cctgaagtgcgtcgtgacctcgcgctgctggtcgatcgcgaacagccggccgaggctgtg
ctgggcgcaatccgtgaaacggcgggagaatggctgacggacctcaagctatttgacgtc
tatcacggtaaaggcattgatccgcttagaaaaagccttgccgtcggcttgacctggcaa
catccatcgcgcactcttaatgacgatgaggtgagtactactacgcaaaatatcctcacc
tgcctcgaacaaaggttcaacgccacgttaaggaagtag
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