Pseudomonas alcaliphila: UYA_14980
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Entry
UYA_14980 CDS
T06680
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pall
Pseudomonas alcaliphila
Pathway
pall02020
Two-component system
pall02025
Biofilm formation - Pseudomonas aeruginosa
pall02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UYA_14980
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
UYA_14980
09142 Cell motility
02040 Flagellar assembly
UYA_14980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pall03000
]
UYA_14980
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pall02035
]
UYA_14980
Transcription factors [BR:
pall03000
]
Prokaryotic type
Helix-turn-helix
Other families
UYA_14980
Bacterial motility proteins [BR:
pall02035
]
Flagellar system
Flagellar assembly proteins
Others
UYA_14980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA
AAA_7
AAA_22
nSTAND3
AAA_2
bpMoxR
AAA_19
Motif
Other DBs
NCBI-ProteinID:
APU30954
UniProt:
A0A1L7G1J6
LinkDB
All DBs
Position
complement(3255124..3256599)
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AA seq
491 aa
AA seq
DB search
MWRETKILLIDDNAARRHELAIILSFLGEEHLACTSQDWRNAVAELASSREVLSVLLGDV
EAKGGALELTKQIAGWDEFLPLLTVGDSSIVEWPEDLRRRVLASLETPLSYNKLLDSLHR
AQVYREMYDQARDRGRQREPNLFRSLVGTSRAIQQVRQMMQQVADTEASVLILGESGTGK
EVVARNLHYHSKRRDAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQTADVRIIAATHKNLEKMIEDGSFR
EDLYYRLNVFPIEMAPLRERIEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHDWAG
NVRELANLVERMAIMHPYGVIGVGELPKKFRHVDDEDEQLAASLRDEMEERAAIMAGLPG
LDTPAMLPPEGLDLKDYLGNLEQGLIQQALDDAGGVVARAAERLRIRRTTLVEKMRKYGM
SRREEDGQDED
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaactaaaatcctgttgatcgatgacaatgctgcgcgccgccacgagttg
gcgatcattctgagttttctcggggaagagcatctggcctgtaccagccaggattggcgc
aatgctgtggccgagctcgcttccagtcgcgaagtgctcagcgtcttgctgggcgatgtc
gaggccaaggggggggcgctcgagctgaccaagcagattgctggctgggatgagttcctg
ccgctattgacggttggcgactccagcatcgtcgagtggccggaagatttgcgcaggcgt
gtgctggccagcctggaaactccacttagctataacaagctgctcgattcgctgcaccgt
gcccaggtctatcgcgagatgtacgaccaggcccgtgatcgtggtcggcagcgcgagccc
aatctgttccgtagcctggtcggtaccagtcgcgccattcagcaggtgcggcagatgatg
cagcaggtcgccgataccgaggccagcgtgttgatcctcggtgagtccggaactggcaag
gaggtggtggcgcgtaacctgcactatcactccaagcgtcgtgacgcgcctttcgtgccg
gtcaactgtggtgccattcctgccgagttgctggagagcgagctgttcgggcatgagaag
ggcgccttcactggtgctatcaccagtcgggcagggcgtttcgagttggccaacggtggc
acgctgtttctcgatgaaatcggcgacatgccgctgccgatgcaggtcaagttgctgcgc
gtgctgcaggaacggaccttcgagcgggtcggcagcaacaagacgcagaccgccgatgtg
cgcatcatcgctgccacgcacaagaacctggagaagatgatcgaggacggcagtttccgc
gaggatctgtattaccgcctcaacgtcttcccgatcgagatggcgccgctgcgcgagcgt
atcgaagatatcccgctgctgatgaacgagctgatttcgcgcatggagcacgagaagcgt
ggctccattcgcttcaactcggccgccatcatgtcgctgtgccgtcatgactgggcaggt
aacgtgcgcgagctggccaacctggtggagcgcatggcgatcatgcatccctacggtgtg
atcggggtgggcgaattgccgaagaaattccgtcatgtcgatgacgaggatgagcaactc
gcggccagccttcgtgatgaaatggaagagcgcgctgcgatcatggccggtttaccgggc
ctcgatacaccagccatgctgccgccggaggggctggacctgaaggactacctgggcaac
ctcgagcagggcctgatccagcaggcgctggacgatgccggtggcgtggtggcgcgtgcg
gctgagcgcctgcgtattcgccgtaccacgctggtcgagaagatgcgcaagtacggcatg
agccgccgcgaagaggatggtcaggacgaggattga
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